RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
CCDC90B-219ENST00000534753 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
CCDC90B-219ENST00000534753 H7BZZ5 65 aa3.52□□□□□ -1.85
CCDC90B-219ENST00000534753 SPATA8Q6RVD6 105 aa3.52□□□□□ -1.85
CCDC90B-219ENST00000534753 ANAPC13Q9BS18 74 aa3.52□□□□□ -1.85
CCDC90B-219ENST00000534753 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
CCDC90B-219ENST00000534753 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
CCDC90B-219ENST00000534753 SPINT4Q6UDR6 99 aa3.5□□□□□ -1.85
CCDC90B-219ENST00000534753 A0A1B0GU33 70 aa3.49□□□□□ -1.85
CCDC90B-219ENST00000534753 SPRR2DP22532 72 aa3.49□□□□□ -1.85
CCDC90B-219ENST00000534753 A0A1B0GU69 56 aa3.45□□□□□ -1.86
CCDC90B-219ENST00000534753 CCDC179H3BU77 68 aa3.44□□□□□ -1.86
CCDC90B-219ENST00000534753 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
CCDC90B-219ENST00000534753 SMIM26A0A096LP01 95 aa3.42□□□□□ -1.86
CCDC90B-219ENST00000534753 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
CCDC90B-219ENST00000534753 KRTAP12-1P59990 96 aa3.4□□□□□ -1.87
CCDC90B-219ENST00000534753 KRTAP2-1Q9BYU5 128 aa3.4□□□□□ -1.87
CCDC90B-219ENST00000534753 PRR15LQ9BU68 103 aa3.35□□□□□ -1.87
CCDC90B-219ENST00000534753 ATP5EP56381 51 aaPredicted RBP3.34□□□□□ -1.87
CCDC90B-219ENST00000534753 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
CCDC90B-219ENST00000534753 MT1EP04732 61 aa3.3□□□□□ -1.88
CCDC90B-219ENST00000534753 KRTAP19-5Q3LI72 72 aa3.3□□□□□ -1.88
CCDC90B-219ENST00000534753 LINC01558Q9Y6Z2 57 aa3.28□□□□□ -1.88
CCDC90B-219ENST00000534753 TMEM258P61165 79 aa3.27□□□□□ -1.89
CCDC90B-219ENST00000534753 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
CCDC90B-219ENST00000534753 C10orf95Q9H7T3 257 aa3.26□□□□□ -1.89
CCDC90B-219ENST00000534753 TNP1P09430 55 aa3.25□□□□□ -1.89
CCDC90B-219ENST00000534753 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
CCDC90B-219ENST00000534753 UQCR11O14957 56 aa3.22□□□□□ -1.89
CCDC90B-219ENST00000534753 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
CCDC90B-219ENST00000534753 MT1GP13640 62 aa3.2□□□□□ -1.9
CCDC90B-219ENST00000534753 PP632Q6XCG6 107 aa3.19□□□□□ -1.9
CCDC90B-219ENST00000534753 MIR22HGQ0VDD5 57 aa3.17□□□□□ -1.9
CCDC90B-219ENST00000534753 MT1LQ93083 61 aa3.17□□□□□ -1.9
CCDC90B-219ENST00000534753 V9GYY9 64 aa3.16□□□□□ -1.9
CCDC90B-219ENST00000534753 PSPHP1O15172 72 aa3.15□□□□□ -1.91
CCDC90B-219ENST00000534753 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
CCDC90B-219ENST00000534753 MT1MQ8N339 61 aa3.15□□□□□ -1.91
CCDC90B-219ENST00000534753 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
CCDC90B-219ENST00000534753 K7ERS5 55 aa3.12□□□□□ -1.91
CCDC90B-219ENST00000534753 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
CCDC90B-219ENST00000534753 MT4P47944 62 aa3.07□□□□□ -1.92
CCDC90B-219ENST00000534753 Q1T7F1 81 aa3.07□□□□□ -1.92
CCDC90B-219ENST00000534753 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
CCDC90B-219ENST00000534753 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
CCDC90B-219ENST00000534753 A6NED7 52 aa3.04□□□□□ -1.92
CCDC90B-219ENST00000534753 PRO0628Q9UI54 55 aa3.03□□□□□ -1.92
CCDC90B-219ENST00000534753 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
CCDC90B-219ENST00000534753 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
CCDC90B-219ENST00000534753 CDC42SE1Q9NRR8 79 aa2.94□□□□□ -1.94
CCDC90B-219ENST00000534753 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
CCDC90B-219ENST00000534753 ROMO1P60602 79 aa2.89□□□□□ -1.95
CCDC90B-219ENST00000534753 RPS28P62857 69 aaKnown RBP2.89□□□□□ -1.95
CCDC90B-219ENST00000534753 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
CCDC90B-219ENST00000534753 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
CCDC90B-219ENST00000534753 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
CCDC90B-219ENST00000534753 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
CCDC90B-219ENST00000534753 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.96
CCDC90B-219ENST00000534753 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
CCDC90B-219ENST00000534753 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
CCDC90B-219ENST00000534753 MT1AP04731 61 aa2.68□□□□□ -1.98
CCDC90B-219ENST00000534753 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
CCDC90B-219ENST00000534753 BRK1Q8WUW1 75 aa2.64□□□□□ -1.99
CCDC90B-219ENST00000534753 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
CCDC90B-219ENST00000534753 LCE1CQ5T751 118 aa2.57□□□□□ -2
CCDC90B-219ENST00000534753 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
CCDC90B-219ENST00000534753 PMAIP1Q13794 54 aa2.46□□□□□ -2.02
CCDC90B-219ENST00000534753 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
CCDC90B-219ENST00000534753 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
CCDC90B-219ENST00000534753 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
CCDC90B-219ENST00000534753 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
CCDC90B-219ENST00000534753 KTN1-AS1Q86SY8 53 aa2.17□□□□□ -2.06
CCDC90B-219ENST00000534753 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
CCDC90B-219ENST00000534753 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
CCDC90B-219ENST00000534753 PRM1P04553 51 aa1.5□□□□□ -2.17
CCDC90B-219ENST00000534753 INE1O15225 51 aa1.48□□□□□ -2.17
CCDC90B-219ENST00000534753 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
CCDC90B-219ENST00000534753 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms