RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 AHNAK2Q8IVF2 5795 aa6.35□□□□□ -1.39
CTSB-233ENST00000534636 PRR15LQ9BU68 103 aa6.35□□□□□ -1.39
CTSB-233ENST00000534636 KRTAP4-6Q9BYQ5 205 aa6.28□□□□□ -1.4
CTSB-233ENST00000534636 ANAPC13Q9BS18 74 aa6.27□□□□□ -1.41
CTSB-233ENST00000534636 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
CTSB-233ENST00000534636 KRTAP5-10Q6L8G5 202 aa6.23□□□□□ -1.41
CTSB-233ENST00000534636 ATP5EP56381 51 aaPredicted RBP6.19□□□□□ -1.42
CTSB-233ENST00000534636 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
CTSB-233ENST00000534636 LINC01558Q9Y6Z2 57 aa6.13□□□□□ -1.43
CTSB-233ENST00000534636 CCDC179H3BU77 68 aa6.1□□□□□ -1.43
CTSB-233ENST00000534636 UQCR11O14957 56 aa6.08□□□□□ -1.44
CTSB-233ENST00000534636 KRTAP20-2Q3LI61 65 aa6.05□□□□□ -1.44
CTSB-233ENST00000534636 KRTAP5-3Q6L8H2 238 aa6.05□□□□□ -1.44
CTSB-233ENST00000534636 KRTAP5-7Q6L8G8 165 aa6.03□□□□□ -1.44
CTSB-233ENST00000534636 KRTAP5-5Q701N2 237 aaPredicted RBP6.03□□□□□ -1.44
CTSB-233ENST00000534636 KRTAP25-1Q3LHN0 102 aa6.01□□□□□ -1.45
CTSB-233ENST00000534636 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
CTSB-233ENST00000534636 KRTAP12-4P60329 112 aa6□□□□□ -1.45
CTSB-233ENST00000534636 K7ERS5 55 aa5.93□□□□□ -1.46
CTSB-233ENST00000534636 TMEM258P61165 79 aa5.92□□□□□ -1.46
CTSB-233ENST00000534636 MIR22HGQ0VDD5 57 aa5.91□□□□□ -1.46
CTSB-233ENST00000534636 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
CTSB-233ENST00000534636 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
CTSB-233ENST00000534636 SYNE1Q8NF91 8797 aaKnown RBP5.8□□□□□ -1.48
CTSB-233ENST00000534636 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
CTSB-233ENST00000534636 KRTAP15-1Q3LI76 137 aa5.75□□□□□ -1.49
CTSB-233ENST00000534636 LCE3CQ5T5A8 94 aa5.71□□□□□ -1.5
CTSB-233ENST00000534636 V9GYY9 64 aa5.68□□□□□ -1.5
CTSB-233ENST00000534636 PSPHP1O15172 72 aa5.66□□□□□ -1.5
CTSB-233ENST00000534636 MT1AP04731 61 aa5.58□□□□□ -1.52
CTSB-233ENST00000534636 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
CTSB-233ENST00000534636 Q1T7F1 81 aa5.56□□□□□ -1.52
CTSB-233ENST00000534636 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
CTSB-233ENST00000534636 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
CTSB-233ENST00000534636 KRTAP5-2Q701N4 177 aa5.54□□□□□ -1.52
CTSB-233ENST00000534636 A6NED7 52 aa5.5□□□□□ -1.53
CTSB-233ENST00000534636 RPS28P62857 69 aaKnown RBP5.47□□□□□ -1.53
CTSB-233ENST00000534636 ROMO1P60602 79 aa5.4□□□□□ -1.54
CTSB-233ENST00000534636 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.54
CTSB-233ENST00000534636 KRTAP5-8O75690 187 aa5.37□□□□□ -1.55
CTSB-233ENST00000534636 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
CTSB-233ENST00000534636 KRTAP9-6A8MVA2 160 aa5.33□□□□□ -1.56
CTSB-233ENST00000534636 MUC5BQ9HC84 5762 aaPredicted RBP5.27□□□□□ -1.57
CTSB-233ENST00000534636 AHNAKQ09666 5890 aaKnown RBP5.26□□□□□ -1.57
CTSB-233ENST00000534636 MUC5ACP98088 5654 aa5.26□□□□□ -1.57
CTSB-233ENST00000534636 OBSCNQ5VST9 7968 aa5.21□□□□□ -1.58
CTSB-233ENST00000534636 KRTAP9-9Q9BYP9 154 aa5.19□□□□□ -1.58
CTSB-233ENST00000534636 MT3P25713 68 aa5.13□□□□□ -1.59
CTSB-233ENST00000534636 KRTAP5-1Q6L8H4 278 aa5□□□□□ -1.61
CTSB-233ENST00000534636 PCP4P48539 62 aa4.98□□□□□ -1.61
CTSB-233ENST00000534636 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
CTSB-233ENST00000534636 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
CTSB-233ENST00000534636 LCE1BQ5T7P3 118 aa4.51□□□□□ -1.69
CTSB-233ENST00000534636 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
CTSB-233ENST00000534636 BRK1Q8WUW1 75 aa4.43□□□□□ -1.7
CTSB-233ENST00000534636 LCE1CQ5T751 118 aa4.4□□□□□ -1.71
CTSB-233ENST00000534636 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
CTSB-233ENST00000534636 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
CTSB-233ENST00000534636 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
CTSB-233ENST00000534636 PRAC1Q96KF2 57 aa4.02□□□□□ -1.77
CTSB-233ENST00000534636 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
CTSB-233ENST00000534636 PRO0628Q9UI54 55 aa3.98□□□□□ -1.77
CTSB-233ENST00000534636 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
CTSB-233ENST00000534636 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
CTSB-233ENST00000534636 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
CTSB-233ENST00000534636 H3BS24 57 aa3.75□□□□□ -1.81
CTSB-233ENST00000534636 KTN1-AS1Q86SY8 53 aa3.7□□□□□ -1.82
CTSB-233ENST00000534636 PHGR1C9JFL3 82 aa3.68□□□□□ -1.82
CTSB-233ENST00000534636 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
CTSB-233ENST00000534636 LUZP6Q538Z0 58 aa3.55□□□□□ -1.84
CTSB-233ENST00000534636 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
CTSB-233ENST00000534636 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
CTSB-233ENST00000534636 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
CTSB-233ENST00000534636 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
CTSB-233ENST00000534636 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
CTSB-233ENST00000534636 PRM1P04553 51 aa2.75□□□□□ -1.97
CTSB-233ENST00000534636 INE1O15225 51 aa2.34□□□□□ -2.03
CTSB-233ENST00000534636 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms