RNA–Protein interactions for RNA: ENST00000534484.1

LMO1-204, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LMO1, Length 770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-204ENST00000534484 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
LMO1-204ENST00000534484 MACF1Q9UPN3 7388 aaKnown RBP4.87□□□□□ -1.63
LMO1-204ENST00000534484 MT1EP04732 61 aa4.87□□□□□ -1.63
LMO1-204ENST00000534484 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
LMO1-204ENST00000534484 KMT2DO14686 5537 aa4.85□□□□□ -1.63
LMO1-204ENST00000534484 LUZP6Q538Z0 58 aa4.81□□□□□ -1.64
LMO1-204ENST00000534484 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
LMO1-204ENST00000534484 NDUFAF8A1L188 74 aa4.8□□□□□ -1.64
LMO1-204ENST00000534484 MT1LQ93083 61 aa4.8□□□□□ -1.64
LMO1-204ENST00000534484 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
LMO1-204ENST00000534484 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
LMO1-204ENST00000534484 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.66
LMO1-204ENST00000534484 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
LMO1-204ENST00000534484 KRTAP19-3Q7Z4W3 81 aa4.65□□□□□ -1.67
LMO1-204ENST00000534484 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
LMO1-204ENST00000534484 MT1GP13640 62 aa4.63□□□□□ -1.67
LMO1-204ENST00000534484 KRTAP5-9P26371 169 aa4.61□□□□□ -1.67
LMO1-204ENST00000534484 SPRR2FQ96RM1 72 aa4.6□□□□□ -1.67
LMO1-204ENST00000534484 MT1MQ8N339 61 aa4.57□□□□□ -1.68
LMO1-204ENST00000534484 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
LMO1-204ENST00000534484 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
LMO1-204ENST00000534484 KRTAP4-2Q9BYR5 136 aa4.54□□□□□ -1.68
LMO1-204ENST00000534484 MUC12Q9UKN1 5478 aa4.47□□□□□ -1.69
LMO1-204ENST00000534484 NEBP20929 6669 aa4.47□□□□□ -1.69
LMO1-204ENST00000534484 SPRR2EP22531 72 aa4.46□□□□□ -1.7
LMO1-204ENST00000534484 SPRR2BP35325 72 aa4.46□□□□□ -1.7
LMO1-204ENST00000534484 SPRR2AP35326 72 aa4.46□□□□□ -1.7
LMO1-204ENST00000534484 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
LMO1-204ENST00000534484 MDN1Q9NU22 5596 aa4.44□□□□□ -1.7
LMO1-204ENST00000534484 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
LMO1-204ENST00000534484 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
LMO1-204ENST00000534484 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
LMO1-204ENST00000534484 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
LMO1-204ENST00000534484 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
LMO1-204ENST00000534484 SPRR2DP22532 72 aa4.31□□□□□ -1.72
LMO1-204ENST00000534484 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
LMO1-204ENST00000534484 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.75
LMO1-204ENST00000534484 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
LMO1-204ENST00000534484 MT1AP04731 61 aa4.09□□□□□ -1.75
LMO1-204ENST00000534484 INE1O15225 51 aa4.04□□□□□ -1.76
LMO1-204ENST00000534484 DSTQ03001 7570 aaKnown RBP4.04□□□□□ -1.76
LMO1-204ENST00000534484 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
LMO1-204ENST00000534484 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
LMO1-204ENST00000534484 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
LMO1-204ENST00000534484 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
LMO1-204ENST00000534484 KRTAP12-4P60329 112 aa3.75□□□□□ -1.81
LMO1-204ENST00000534484 MT4P47944 62 aa3.74□□□□□ -1.81
LMO1-204ENST00000534484 MT3P25713 68 aa3.68□□□□□ -1.82
LMO1-204ENST00000534484 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
LMO1-204ENST00000534484 HMCN1Q96RW7 5635 aa3.65□□□□□ -1.82
LMO1-204ENST00000534484 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
LMO1-204ENST00000534484 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
LMO1-204ENST00000534484 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
LMO1-204ENST00000534484 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
LMO1-204ENST00000534484 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
LMO1-204ENST00000534484 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
LMO1-204ENST00000534484 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
LMO1-204ENST00000534484 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
LMO1-204ENST00000534484 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
LMO1-204ENST00000534484 KRTAP5-7Q6L8G8 165 aa3.16□□□□□ -1.9
LMO1-204ENST00000534484 PRM1P04553 51 aa3.13□□□□□ -1.91
LMO1-204ENST00000534484 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
LMO1-204ENST00000534484 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
LMO1-204ENST00000534484 KRTAP5-8O75690 187 aa3□□□□□ -1.93
LMO1-204ENST00000534484 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
LMO1-204ENST00000534484 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
LMO1-204ENST00000534484 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
LMO1-204ENST00000534484 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
LMO1-204ENST00000534484 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
LMO1-204ENST00000534484 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
LMO1-204ENST00000534484 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
LMO1-204ENST00000534484 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
LMO1-204ENST00000534484 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
LMO1-204ENST00000534484 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
LMO1-204ENST00000534484 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
LMO1-204ENST00000534484 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
LMO1-204ENST00000534484 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 37.2 ms