RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 LCE3AQ5TA76 89 aa8.25□□□□□ -1.09
YIF1A-213ENST00000534374 LCE1DQ5T752 114 aa8.18□□□□□ -1.1
YIF1A-213ENST00000534374 LCE4AQ5TA78 99 aa8.16□□□□□ -1.1
YIF1A-213ENST00000534374 UQCR11O14957 56 aa8.12□□□□□ -1.11
YIF1A-213ENST00000534374 HMCN1Q96RW7 5635 aa8.11□□□□□ -1.11
YIF1A-213ENST00000534374 MT4P47944 62 aa8.04□□□□□ -1.12
YIF1A-213ENST00000534374 KRTAP4-3Q9BYR4 195 aa8.03□□□□□ -1.12
YIF1A-213ENST00000534374 KRTAP12-3P60328 96 aa7.97□□□□□ -1.13
YIF1A-213ENST00000534374 MIR22HGQ0VDD5 57 aa7.95□□□□□ -1.14
YIF1A-213ENST00000534374 KRTAP5-4Q6L8H1 288 aa7.95□□□□□ -1.14
YIF1A-213ENST00000534374 AHNAK2Q8IVF2 5795 aa7.9□□□□□ -1.15
YIF1A-213ENST00000534374 V9GYY9 64 aa7.89□□□□□ -1.15
YIF1A-213ENST00000534374 PSPHP1O15172 72 aa7.88□□□□□ -1.15
YIF1A-213ENST00000534374 Q1T7F1 81 aa7.87□□□□□ -1.15
YIF1A-213ENST00000534374 KRTAP4-7Q9BYR0 210 aa7.83□□□□□ -1.16
YIF1A-213ENST00000534374 KRTAP25-1Q3LHN0 102 aa7.82□□□□□ -1.16
YIF1A-213ENST00000534374 KRTAP5-10Q6L8G5 202 aa7.78□□□□□ -1.16
YIF1A-213ENST00000534374 KRTAP4-6Q9BYQ5 205 aa7.77□□□□□ -1.17
YIF1A-213ENST00000534374 K7ERS5 55 aa7.76□□□□□ -1.17
YIF1A-213ENST00000534374 RPS28P62857 69 aaKnown RBP7.72□□□□□ -1.17
YIF1A-213ENST00000534374 KRTAP19-4Q3LI73 84 aa7.64□□□□□ -1.19
YIF1A-213ENST00000534374 A6NED7 52 aa7.6□□□□□ -1.19
YIF1A-213ENST00000534374 KRTAP5-5Q701N2 237 aaPredicted RBP7.6□□□□□ -1.19
YIF1A-213ENST00000534374 KRTAP23-1A1A580 65 aa7.58□□□□□ -1.2
YIF1A-213ENST00000534374 KRTAP5-7Q6L8G8 165 aa7.55□□□□□ -1.2
YIF1A-213ENST00000534374 KRTAP5-3Q6L8H2 238 aa7.54□□□□□ -1.2
YIF1A-213ENST00000534374 SPRR5A0A1B0GTR4 108 aa7.49□□□□□ -1.21
YIF1A-213ENST00000534374 KRTAP20-2Q3LI61 65 aa7.48□□□□□ -1.21
YIF1A-213ENST00000534374 KRTAP12-4P60329 112 aa7.45□□□□□ -1.22
YIF1A-213ENST00000534374 KRTAP15-1Q3LI76 137 aa7.44□□□□□ -1.22
YIF1A-213ENST00000534374 LOC100996750A0A140TA64 210 aa7.43□□□□□ -1.22
YIF1A-213ENST00000534374 SYNE1Q8NF91 8797 aaKnown RBP7.39□□□□□ -1.23
YIF1A-213ENST00000534374 CDC42SE1Q9NRR8 79 aa7.37□□□□□ -1.23
YIF1A-213ENST00000534374 LCE3CQ5T5A8 94 aa7.35□□□□□ -1.23
YIF1A-213ENST00000534374 ROMO1P60602 79 aa7.27□□□□□ -1.25
YIF1A-213ENST00000534374 MT1AP04731 61 aa7.05□□□□□ -1.28
YIF1A-213ENST00000534374 KRTAP6-1Q3LI64 71 aa6.99□□□□□ -1.29
YIF1A-213ENST00000534374 KRTAP5-2Q701N4 177 aa6.95□□□□□ -1.3
YIF1A-213ENST00000534374 KRTAP4-11Q9BYQ6 195 aa6.92□□□□□ -1.3
YIF1A-213ENST00000534374 KRTAP9-6A8MVA2 160 aa6.9□□□□□ -1.3
YIF1A-213ENST00000534374 BRK1Q8WUW1 75 aa6.89□□□□□ -1.31
YIF1A-213ENST00000534374 KRTAP9-4Q9BYQ2 154 aa6.85□□□□□ -1.31
YIF1A-213ENST00000534374 KRTAP6-2Q3LI66 62 aa6.7□□□□□ -1.34
YIF1A-213ENST00000534374 KRTAP5-8O75690 187 aa6.67□□□□□ -1.34
YIF1A-213ENST00000534374 AHNAKQ09666 5890 aaKnown RBP6.62□□□□□ -1.35
YIF1A-213ENST00000534374 OBSCNQ5VST9 7968 aa6.62□□□□□ -1.35
YIF1A-213ENST00000534374 MUC5BQ9HC84 5762 aaPredicted RBP6.6□□□□□ -1.35
YIF1A-213ENST00000534374 PRO0628Q9UI54 55 aa6.6□□□□□ -1.35
YIF1A-213ENST00000534374 MUC5ACP98088 5654 aa6.6□□□□□ -1.35
YIF1A-213ENST00000534374 PMAIP1Q13794 54 aa6.52□□□□□ -1.37
YIF1A-213ENST00000534374 MT3P25713 68 aa6.48□□□□□ -1.37
YIF1A-213ENST00000534374 KRTAP9-9Q9BYP9 154 aa6.44□□□□□ -1.38
YIF1A-213ENST00000534374 KRTAP5-1Q6L8H4 278 aa6.24□□□□□ -1.41
YIF1A-213ENST00000534374 KTN1-AS1Q86SY8 53 aa6.17□□□□□ -1.42
YIF1A-213ENST00000534374 PRAC1Q96KF2 57 aa6.08□□□□□ -1.44
YIF1A-213ENST00000534374 LCE1EQ5T753 118 aa6□□□□□ -1.45
YIF1A-213ENST00000534374 SVIPQ8NHG7 77 aa5.83□□□□□ -1.48
YIF1A-213ENST00000534374 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
YIF1A-213ENST00000534374 LCE1BQ5T7P3 118 aa5.58□□□□□ -1.52
YIF1A-213ENST00000534374 LCE1CQ5T751 118 aa5.55□□□□□ -1.52
YIF1A-213ENST00000534374 LCE3DQ9BYE3 92 aa5.29□□□□□ -1.56
YIF1A-213ENST00000534374 LUZP6Q538Z0 58 aa5.11□□□□□ -1.59
YIF1A-213ENST00000534374 KRTAP4-12Q9BQ66 201 aa5.09□□□□□ -1.59
YIF1A-213ENST00000534374 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.05□□□□□ -1.6
YIF1A-213ENST00000534374 KRTAP5-11Q6L8G4 156 aa5.02□□□□□ -1.61
YIF1A-213ENST00000534374 LCE3EQ5T5B0 92 aa4.96□□□□□ -1.62
YIF1A-213ENST00000534374 LCE1FQ5T754 118 aa4.95□□□□□ -1.62
YIF1A-213ENST00000534374 NDUFAF8A1L188 74 aa4.7□□□□□ -1.66
YIF1A-213ENST00000534374 KRTAP21-2Q3LI59 83 aa4.63□□□□□ -1.67
YIF1A-213ENST00000534374 PHGR1C9JFL3 82 aa4.55□□□□□ -1.68
YIF1A-213ENST00000534374 KRTAP4-4Q9BYR3 166 aa4.2□□□□□ -1.74
YIF1A-213ENST00000534374 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
YIF1A-213ENST00000534374 MUC19Q7Z5P9 8384 aa4.11□□□□□ -1.75
YIF1A-213ENST00000534374 INE1O15225 51 aa3.94□□□□□ -1.78
YIF1A-213ENST00000534374 PRM1P04553 51 aa3.74□□□□□ -1.81
YIF1A-213ENST00000534374 H3BS24 57 aa3.6□□□□□ -1.83
YIF1A-213ENST00000534374 KRTAP21-1Q3LI58 79 aa3.51□□□□□ -1.85
YIF1A-213ENST00000534374 MUC16Q8WXI7 14507 aa2.9□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 53.7 ms