RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 CYSTM1Q9H1C7 97 aa3.24□□□□□ -1.89
COPB1-211ENST00000534234 H7BZZ5 65 aa3.23□□□□□ -1.89
COPB1-211ENST00000534234 PP632Q6XCG6 107 aa3.21□□□□□ -1.9
COPB1-211ENST00000534234 SMIM26A0A096LP01 95 aa3.2□□□□□ -1.9
COPB1-211ENST00000534234 A0A1B0GU69 56 aa3.19□□□□□ -1.9
COPB1-211ENST00000534234 PRAC1Q96KF2 57 aa3.19□□□□□ -1.9
COPB1-211ENST00000534234 A8MU10 97 aa3.17□□□□□ -1.9
COPB1-211ENST00000534234 MT1MQ8N339 61 aa3.17□□□□□ -1.9
COPB1-211ENST00000534234 MT1LQ93083 61 aa3.16□□□□□ -1.9
COPB1-211ENST00000534234 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
COPB1-211ENST00000534234 TNP1P09430 55 aa3.14□□□□□ -1.91
COPB1-211ENST00000534234 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
COPB1-211ENST00000534234 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
COPB1-211ENST00000534234 MT4P47944 62 aa3.12□□□□□ -1.91
COPB1-211ENST00000534234 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
COPB1-211ENST00000534234 ANAPC13Q9BS18 74 aa3.09□□□□□ -1.91
COPB1-211ENST00000534234 PRR15LQ9BU68 103 aa3.07□□□□□ -1.92
COPB1-211ENST00000534234 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
COPB1-211ENST00000534234 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
COPB1-211ENST00000534234 CCDC179H3BU77 68 aa3.04□□□□□ -1.92
COPB1-211ENST00000534234 KRTAP12-3P60328 96 aa3.02□□□□□ -1.93
COPB1-211ENST00000534234 LINC01558Q9Y6Z2 57 aa3.02□□□□□ -1.93
COPB1-211ENST00000534234 ATP5EP56381 51 aaPredicted RBP3.01□□□□□ -1.93
COPB1-211ENST00000534234 UQCR11O14957 56 aa2.98□□□□□ -1.93
COPB1-211ENST00000534234 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
COPB1-211ENST00000534234 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
COPB1-211ENST00000534234 MT3P25713 68 aa2.91□□□□□ -1.94
COPB1-211ENST00000534234 KRTAP25-1Q3LHN0 102 aa2.91□□□□□ -1.94
COPB1-211ENST00000534234 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
COPB1-211ENST00000534234 TMEM258P61165 79 aa2.91□□□□□ -1.94
COPB1-211ENST00000534234 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
COPB1-211ENST00000534234 MIR22HGQ0VDD5 57 aa2.9□□□□□ -1.95
COPB1-211ENST00000534234 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.95
COPB1-211ENST00000534234 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
COPB1-211ENST00000534234 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
COPB1-211ENST00000534234 KRTAP12-4P60329 112 aa2.87□□□□□ -1.95
COPB1-211ENST00000534234 K7ERS5 55 aa2.87□□□□□ -1.95
COPB1-211ENST00000534234 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
COPB1-211ENST00000534234 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
COPB1-211ENST00000534234 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
COPB1-211ENST00000534234 PSPHP1O15172 72 aa2.8□□□□□ -1.96
COPB1-211ENST00000534234 V9GYY9 64 aa2.78□□□□□ -1.96
COPB1-211ENST00000534234 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
COPB1-211ENST00000534234 LCE3CQ5T5A8 94 aa2.78□□□□□ -1.96
COPB1-211ENST00000534234 Q1T7F1 81 aa2.75□□□□□ -1.97
COPB1-211ENST00000534234 A6NED7 52 aa2.7□□□□□ -1.98
COPB1-211ENST00000534234 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
COPB1-211ENST00000534234 MT1AP04731 61 aa2.68□□□□□ -1.98
COPB1-211ENST00000534234 KRTAP6-1Q3LI64 71 aa2.68□□□□□ -1.98
COPB1-211ENST00000534234 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
COPB1-211ENST00000534234 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
COPB1-211ENST00000534234 ROMO1P60602 79 aa2.65□□□□□ -1.99
COPB1-211ENST00000534234 RPS28P62857 69 aaKnown RBP2.65□□□□□ -1.99
COPB1-211ENST00000534234 KRTAP9-6A8MVA2 160 aa2.61□□□□□ -1.99
COPB1-211ENST00000534234 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
COPB1-211ENST00000534234 KRTAP5-8O75690 187 aa2.57□□□□□ -2
COPB1-211ENST00000534234 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
COPB1-211ENST00000534234 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
COPB1-211ENST00000534234 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
COPB1-211ENST00000534234 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
COPB1-211ENST00000534234 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.02
COPB1-211ENST00000534234 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.02
COPB1-211ENST00000534234 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
COPB1-211ENST00000534234 BRK1Q8WUW1 75 aa2.2□□□□□ -2.06
COPB1-211ENST00000534234 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
COPB1-211ENST00000534234 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
COPB1-211ENST00000534234 PRO0628Q9UI54 55 aa2.11□□□□□ -2.07
COPB1-211ENST00000534234 LUZP6Q538Z0 58 aa2.09□□□□□ -2.08
COPB1-211ENST00000534234 PMAIP1Q13794 54 aa2.08□□□□□ -2.08
COPB1-211ENST00000534234 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
COPB1-211ENST00000534234 KTN1-AS1Q86SY8 53 aa1.88□□□□□ -2.11
COPB1-211ENST00000534234 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
COPB1-211ENST00000534234 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
COPB1-211ENST00000534234 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
COPB1-211ENST00000534234 INE1O15225 51 aa1.4□□□□□ -2.19
COPB1-211ENST00000534234 PRM1P04553 51 aa1.34□□□□□ -2.19
COPB1-211ENST00000534234 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
COPB1-211ENST00000534234 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms