RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 MT1EP04732 61 aa3.43□□□□□ -1.86
RTL1-201ENST00000534062 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
RTL1-201ENST00000534062 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
RTL1-201ENST00000534062 MT1LQ93083 61 aa3.36□□□□□ -1.87
RTL1-201ENST00000534062 KRTAP4-7Q9BYR0 210 aa3.36□□□□□ -1.87
RTL1-201ENST00000534062 SPRR2EP22531 72 aa3.32□□□□□ -1.88
RTL1-201ENST00000534062 SPRR2BP35325 72 aa3.32□□□□□ -1.88
RTL1-201ENST00000534062 SPRR2AP35326 72 aa3.32□□□□□ -1.88
RTL1-201ENST00000534062 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
RTL1-201ENST00000534062 MDN1Q9NU22 5596 aa3.29□□□□□ -1.88
RTL1-201ENST00000534062 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
RTL1-201ENST00000534062 MT1GP13640 62 aa3.27□□□□□ -1.89
RTL1-201ENST00000534062 KRTAP19-4Q3LI73 84 aa3.27□□□□□ -1.89
RTL1-201ENST00000534062 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
RTL1-201ENST00000534062 KRTAP9-7A8MTY7 169 aa3.26□□□□□ -1.89
RTL1-201ENST00000534062 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
RTL1-201ENST00000534062 KRTAP6-3Q3LI67 103 aa3.26□□□□□ -1.89
RTL1-201ENST00000534062 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
RTL1-201ENST00000534062 MT1MQ8N339 61 aa3.24□□□□□ -1.89
RTL1-201ENST00000534062 LCE1AQ5T7P2 110 aa3.23□□□□□ -1.89
RTL1-201ENST00000534062 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
RTL1-201ENST00000534062 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
RTL1-201ENST00000534062 KRTAP2-1Q9BYU5 128 aa3.22□□□□□ -1.89
RTL1-201ENST00000534062 LCE5AQ5TCM9 118 aa3.2□□□□□ -1.9
RTL1-201ENST00000534062 SPRR2DP22532 72 aa3.19□□□□□ -1.9
RTL1-201ENST00000534062 LOC100996750A0A140TA64 210 aa3.15□□□□□ -1.9
RTL1-201ENST00000534062 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
RTL1-201ENST00000534062 LCE3BQ5TA77 95 aa3.03□□□□□ -1.92
RTL1-201ENST00000534062 NEBP20929 6669 aa3.03□□□□□ -1.92
RTL1-201ENST00000534062 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
RTL1-201ENST00000534062 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
RTL1-201ENST00000534062 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
RTL1-201ENST00000534062 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
RTL1-201ENST00000534062 MT1AP04731 61 aa2.84□□□□□ -1.95
RTL1-201ENST00000534062 MT4P47944 62 aa2.83□□□□□ -1.96
RTL1-201ENST00000534062 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
RTL1-201ENST00000534062 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
RTL1-201ENST00000534062 KRTAP4-9Q9BYQ8 210 aa2.8□□□□□ -1.96
RTL1-201ENST00000534062 LCE4AQ5TA78 99 aa2.78□□□□□ -1.96
RTL1-201ENST00000534062 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.97
RTL1-201ENST00000534062 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
RTL1-201ENST00000534062 PRM1P04553 51 aa2.72□□□□□ -1.97
RTL1-201ENST00000534062 MT3P25713 68 aa2.72□□□□□ -1.97
RTL1-201ENST00000534062 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
RTL1-201ENST00000534062 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
RTL1-201ENST00000534062 KRTAP9-4Q9BYQ2 154 aa2.7□□□□□ -1.98
RTL1-201ENST00000534062 LCE1DQ5T752 114 aa2.68□□□□□ -1.98
RTL1-201ENST00000534062 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
RTL1-201ENST00000534062 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
RTL1-201ENST00000534062 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
RTL1-201ENST00000534062 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
RTL1-201ENST00000534062 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
RTL1-201ENST00000534062 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
RTL1-201ENST00000534062 KRTAP5-3Q6L8H2 238 aa2.43□□□□□ -2.02
RTL1-201ENST00000534062 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
RTL1-201ENST00000534062 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
RTL1-201ENST00000534062 KRTAP4-11Q9BYQ6 195 aa2.28□□□□□ -2.04
RTL1-201ENST00000534062 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
RTL1-201ENST00000534062 KRTAP9-9Q9BYP9 154 aa2.27□□□□□ -2.05
RTL1-201ENST00000534062 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
RTL1-201ENST00000534062 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
RTL1-201ENST00000534062 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
RTL1-201ENST00000534062 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
RTL1-201ENST00000534062 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
RTL1-201ENST00000534062 KRTAP4-2Q9BYR5 136 aa2.06□□□□□ -2.08
RTL1-201ENST00000534062 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
RTL1-201ENST00000534062 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
RTL1-201ENST00000534062 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
RTL1-201ENST00000534062 KRTAP4-12Q9BQ66 201 aa1.89□□□□□ -2.11
RTL1-201ENST00000534062 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
RTL1-201ENST00000534062 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
RTL1-201ENST00000534062 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
RTL1-201ENST00000534062 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
RTL1-201ENST00000534062 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
RTL1-201ENST00000534062 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
RTL1-201ENST00000534062 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
RTL1-201ENST00000534062 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 40.6 ms