RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
SOX9-AS1-213ENST00000533996 SPTSSBQ8NFR3 76 aa3.1□□□□□ -1.91
SOX9-AS1-213ENST00000533996 HIST1H4AP62805 103 aaKnown RBP3.07□□□□□ -1.92
SOX9-AS1-213ENST00000533996 GTF2H5Q6ZYL4 71 aa3.07□□□□□ -1.92
SOX9-AS1-213ENST00000533996 ETDBQ3ZM63 59 aa3.06□□□□□ -1.92
SOX9-AS1-213ENST00000533996 ATP5EP2Q5VTU8 51 aa3.06□□□□□ -1.92
SOX9-AS1-213ENST00000533996 H3BPC8 53 aa3.05□□□□□ -1.92
SOX9-AS1-213ENST00000533996 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
SOX9-AS1-213ENST00000533996 ACYP2P14621 99 aa3.04□□□□□ -1.92
SOX9-AS1-213ENST00000533996 KRTAP13-4Q3LI77 160 aa3.04□□□□□ -1.92
SOX9-AS1-213ENST00000533996 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
SOX9-AS1-213ENST00000533996 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
SOX9-AS1-213ENST00000533996 F8W1H4 67 aa3.03□□□□□ -1.92
SOX9-AS1-213ENST00000533996 C10orf95Q9H7T3 257 aa3.01□□□□□ -1.93
SOX9-AS1-213ENST00000533996 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
SOX9-AS1-213ENST00000533996 KRTAP5-8O75690 187 aa3□□□□□ -1.93
SOX9-AS1-213ENST00000533996 LCE3AQ5TA76 89 aa3□□□□□ -1.93
SOX9-AS1-213ENST00000533996 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
SOX9-AS1-213ENST00000533996 SMIM26A0A096LP01 95 aa2.95□□□□□ -1.94
SOX9-AS1-213ENST00000533996 CHKB-CPT1BH3BT56 60 aa2.94□□□□□ -1.94
SOX9-AS1-213ENST00000533996 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
SOX9-AS1-213ENST00000533996 FAM240AA0A1B0GVK7 77 aa2.93□□□□□ -1.94
SOX9-AS1-213ENST00000533996 SPINT4Q6UDR6 99 aa2.91□□□□□ -1.94
SOX9-AS1-213ENST00000533996 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
SOX9-AS1-213ENST00000533996 TNP1P09430 55 aa2.88□□□□□ -1.95
SOX9-AS1-213ENST00000533996 SPANXA2-OT1Q8N9U9 137 aa2.88□□□□□ -1.95
SOX9-AS1-213ENST00000533996 KRTAP12-3P60328 96 aa2.87□□□□□ -1.95
SOX9-AS1-213ENST00000533996 LINC00643Q86TS7 51 aa2.87□□□□□ -1.95
SOX9-AS1-213ENST00000533996 J3QR89 54 aa2.86□□□□□ -1.95
SOX9-AS1-213ENST00000533996 KRTAP12-1P59990 96 aa2.86□□□□□ -1.95
SOX9-AS1-213ENST00000533996 K7ERU9 68 aa2.83□□□□□ -1.96
SOX9-AS1-213ENST00000533996 PSPHP1O15172 72 aa2.83□□□□□ -1.96
SOX9-AS1-213ENST00000533996 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
SOX9-AS1-213ENST00000533996 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
SOX9-AS1-213ENST00000533996 SPATA8Q6RVD6 105 aa2.81□□□□□ -1.96
SOX9-AS1-213ENST00000533996 SCGB1A1P11684 91 aa2.79□□□□□ -1.96
SOX9-AS1-213ENST00000533996 SERP1Q9Y6X1 66 aa2.78□□□□□ -1.96
SOX9-AS1-213ENST00000533996 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
SOX9-AS1-213ENST00000533996 A0A1B0GU33 70 aa2.75□□□□□ -1.97
SOX9-AS1-213ENST00000533996 MT1AP04731 61 aa2.75□□□□□ -1.97
SOX9-AS1-213ENST00000533996 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
SOX9-AS1-213ENST00000533996 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
SOX9-AS1-213ENST00000533996 SNURFQ9Y675 71 aa2.7□□□□□ -1.98
SOX9-AS1-213ENST00000533996 PRO0628Q9UI54 55 aa2.67□□□□□ -1.98
SOX9-AS1-213ENST00000533996 SMIM20Q8N5G0 67 aa2.65□□□□□ -1.99
SOX9-AS1-213ENST00000533996 SERP2Q8N6R1 65 aa2.65□□□□□ -1.99
SOX9-AS1-213ENST00000533996 V9GYY9 64 aa2.65□□□□□ -1.99
SOX9-AS1-213ENST00000533996 CCDC179H3BU77 68 aa2.61□□□□□ -1.99
SOX9-AS1-213ENST00000533996 COX7CP15954 63 aa2.61□□□□□ -1.99
SOX9-AS1-213ENST00000533996 KRTAP25-1Q3LHN0 102 aa2.61□□□□□ -1.99
SOX9-AS1-213ENST00000533996 ANAPC13Q9BS18 74 aa2.61□□□□□ -1.99
SOX9-AS1-213ENST00000533996 COA5Q86WW8 74 aa2.6□□□□□ -1.99
SOX9-AS1-213ENST00000533996 LCE1CQ5T751 118 aa2.58□□□□□ -2
SOX9-AS1-213ENST00000533996 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
SOX9-AS1-213ENST00000533996 H7BZZ5 65 aa2.56□□□□□ -2
SOX9-AS1-213ENST00000533996 K7ERS5 55 aa2.52□□□□□ -2.01
SOX9-AS1-213ENST00000533996 A0A1B0GU69 56 aa2.5□□□□□ -2.01
SOX9-AS1-213ENST00000533996 TMEM258P61165 79 aa2.42□□□□□ -2.02
SOX9-AS1-213ENST00000533996 ATP5EP56381 51 aaPredicted RBP2.4□□□□□ -2.03
SOX9-AS1-213ENST00000533996 PRR15LQ9BU68 103 aa2.38□□□□□ -2.03
SOX9-AS1-213ENST00000533996 A6NED7 52 aa2.37□□□□□ -2.03
SOX9-AS1-213ENST00000533996 LINC01558Q9Y6Z2 57 aa2.34□□□□□ -2.03
SOX9-AS1-213ENST00000533996 Q1T7F1 81 aa2.26□□□□□ -2.05
SOX9-AS1-213ENST00000533996 UQCR11O14957 56 aa2.23□□□□□ -2.05
SOX9-AS1-213ENST00000533996 RPS28P62857 69 aaKnown RBP2.23□□□□□ -2.05
SOX9-AS1-213ENST00000533996 MIR22HGQ0VDD5 57 aa2.23□□□□□ -2.05
SOX9-AS1-213ENST00000533996 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
SOX9-AS1-213ENST00000533996 CDC42SE1Q9NRR8 79 aa2.1□□□□□ -2.07
SOX9-AS1-213ENST00000533996 BRK1Q8WUW1 75 aa2.05□□□□□ -2.08
SOX9-AS1-213ENST00000533996 ROMO1P60602 79 aa2.03□□□□□ -2.08
SOX9-AS1-213ENST00000533996 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
SOX9-AS1-213ENST00000533996 PMAIP1Q13794 54 aa1.92□□□□□ -2.1
SOX9-AS1-213ENST00000533996 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
SOX9-AS1-213ENST00000533996 KTN1-AS1Q86SY8 53 aa1.78□□□□□ -2.12
SOX9-AS1-213ENST00000533996 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
SOX9-AS1-213ENST00000533996 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
SOX9-AS1-213ENST00000533996 INE1O15225 51 aa1.25□□□□□ -2.21
SOX9-AS1-213ENST00000533996 PRM1P04553 51 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 51.5 ms