RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 FSIP2Q5CZC0 6907 aa4.84□□□□□ -1.63
CCDC90B-218ENST00000533761 PLAC4Q8WY50 150 aa4.81□□□□□ -1.64
CCDC90B-218ENST00000533761 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
CCDC90B-218ENST00000533761 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
CCDC90B-218ENST00000533761 CRCT1Q9UGL9 99 aa4.78□□□□□ -1.64
CCDC90B-218ENST00000533761 KRTAP12-2P59991 146 aa4.77□□□□□ -1.65
CCDC90B-218ENST00000533761 USH2AO75445 5202 aa4.76□□□□□ -1.65
CCDC90B-218ENST00000533761 KRTAP19-8Q3LI54 63 aa4.75□□□□□ -1.65
CCDC90B-218ENST00000533761 MT3P25713 68 aa4.72□□□□□ -1.65
CCDC90B-218ENST00000533761 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
CCDC90B-218ENST00000533761 MT1BP07438 61 aa4.7□□□□□ -1.66
CCDC90B-218ENST00000533761 KRTAP19-6Q3LI70 58 aa4.66□□□□□ -1.66
CCDC90B-218ENST00000533761 PRO2289Q9P1D8 64 aa4.65□□□□□ -1.67
CCDC90B-218ENST00000533761 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
CCDC90B-218ENST00000533761 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
CCDC90B-218ENST00000533761 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
CCDC90B-218ENST00000533761 TNP1P09430 55 aa4.52□□□□□ -1.69
CCDC90B-218ENST00000533761 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
CCDC90B-218ENST00000533761 MT1XP80297 61 aa4.49□□□□□ -1.69
CCDC90B-218ENST00000533761 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
CCDC90B-218ENST00000533761 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
CCDC90B-218ENST00000533761 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
CCDC90B-218ENST00000533761 KRTAP6-3Q3LI67 103 aa4.23□□□□□ -1.73
CCDC90B-218ENST00000533761 INE1O15225 51 aa4.23□□□□□ -1.73
CCDC90B-218ENST00000533761 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
CCDC90B-218ENST00000533761 KRTAP8-1Q8IUC2 63 aa4.21□□□□□ -1.74
CCDC90B-218ENST00000533761 KMT2DO14686 5537 aa4.19□□□□□ -1.74
CCDC90B-218ENST00000533761 SPRR2FQ96RM1 72 aa4.12□□□□□ -1.75
CCDC90B-218ENST00000533761 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
CCDC90B-218ENST00000533761 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
CCDC90B-218ENST00000533761 KRTAP19-5Q3LI72 72 aa4.06□□□□□ -1.76
CCDC90B-218ENST00000533761 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
CCDC90B-218ENST00000533761 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
CCDC90B-218ENST00000533761 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
CCDC90B-218ENST00000533761 SPRR2EP22531 72 aa3.98□□□□□ -1.77
CCDC90B-218ENST00000533761 SPRR2BP35325 72 aa3.98□□□□□ -1.77
CCDC90B-218ENST00000533761 SPRR2AP35326 72 aa3.98□□□□□ -1.77
CCDC90B-218ENST00000533761 MDN1Q9NU22 5596 aa3.97□□□□□ -1.77
CCDC90B-218ENST00000533761 MT1EP04732 61 aa3.96□□□□□ -1.78
CCDC90B-218ENST00000533761 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
CCDC90B-218ENST00000533761 NEBP20929 6669 aa3.93□□□□□ -1.78
CCDC90B-218ENST00000533761 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
CCDC90B-218ENST00000533761 MT1LQ93083 61 aa3.87□□□□□ -1.79
CCDC90B-218ENST00000533761 SPRR2DP22532 72 aa3.85□□□□□ -1.79
CCDC90B-218ENST00000533761 MT1GP13640 62 aa3.84□□□□□ -1.8
CCDC90B-218ENST00000533761 KRTAP5-5Q701N2 237 aaPredicted RBP3.81□□□□□ -1.8
CCDC90B-218ENST00000533761 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
CCDC90B-218ENST00000533761 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
CCDC90B-218ENST00000533761 KRTAP2-3P0C7H8 128 aa3.77□□□□□ -1.81
CCDC90B-218ENST00000533761 KRTAP2-4Q9BYR9 128 aa3.77□□□□□ -1.81
CCDC90B-218ENST00000533761 MT1MQ8N339 61 aa3.75□□□□□ -1.81
CCDC90B-218ENST00000533761 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
CCDC90B-218ENST00000533761 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
CCDC90B-218ENST00000533761 KRTAP2-1Q9BYU5 128 aa3.68□□□□□ -1.82
CCDC90B-218ENST00000533761 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
CCDC90B-218ENST00000533761 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
CCDC90B-218ENST00000533761 MT4P47944 62 aa3.34□□□□□ -1.88
CCDC90B-218ENST00000533761 MT1AP04731 61 aa3.32□□□□□ -1.88
CCDC90B-218ENST00000533761 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
CCDC90B-218ENST00000533761 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
CCDC90B-218ENST00000533761 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
CCDC90B-218ENST00000533761 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
CCDC90B-218ENST00000533761 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
CCDC90B-218ENST00000533761 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
CCDC90B-218ENST00000533761 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
CCDC90B-218ENST00000533761 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
CCDC90B-218ENST00000533761 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
CCDC90B-218ENST00000533761 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
CCDC90B-218ENST00000533761 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
CCDC90B-218ENST00000533761 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
CCDC90B-218ENST00000533761 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
CCDC90B-218ENST00000533761 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
CCDC90B-218ENST00000533761 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
CCDC90B-218ENST00000533761 PRM1P04553 51 aa2.37□□□□□ -2.03
CCDC90B-218ENST00000533761 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
CCDC90B-218ENST00000533761 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
CCDC90B-218ENST00000533761 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
CCDC90B-218ENST00000533761 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 59.5 ms