RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
TSKU-204ENST00000533752 MT1GP13640 62 aa5.71□□□□□ -1.5
TSKU-204ENST00000533752 PP632Q6XCG6 107 aa5.7□□□□□ -1.5
TSKU-204ENST00000533752 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
TSKU-204ENST00000533752 A6NED7 52 aa5.65□□□□□ -1.5
TSKU-204ENST00000533752 MT1LQ93083 61 aa5.65□□□□□ -1.5
TSKU-204ENST00000533752 GPR98Q8WXG9 6306 aa5.64□□□□□ -1.51
TSKU-204ENST00000533752 MT1MQ8N339 61 aa5.59□□□□□ -1.51
TSKU-204ENST00000533752 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
TSKU-204ENST00000533752 DSTQ03001 7570 aaKnown RBP5.56□□□□□ -1.52
TSKU-204ENST00000533752 PRO0628Q9UI54 55 aa5.51□□□□□ -1.53
TSKU-204ENST00000533752 BRK1Q8WUW1 75 aa5.49□□□□□ -1.53
TSKU-204ENST00000533752 CDC42SE1Q9NRR8 79 aa5.47□□□□□ -1.53
TSKU-204ENST00000533752 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
TSKU-204ENST00000533752 SVIPQ8NHG7 77 aa5.4□□□□□ -1.54
TSKU-204ENST00000533752 KRTAP4-3Q9BYR4 195 aa5.39□□□□□ -1.55
TSKU-204ENST00000533752 ROMO1P60602 79 aa5.37□□□□□ -1.55
TSKU-204ENST00000533752 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
TSKU-204ENST00000533752 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
TSKU-204ENST00000533752 KRTAP4-9Q9BYQ8 210 aa5.34□□□□□ -1.55
TSKU-204ENST00000533752 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
TSKU-204ENST00000533752 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
TSKU-204ENST00000533752 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
TSKU-204ENST00000533752 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
TSKU-204ENST00000533752 PMAIP1Q13794 54 aa5.23□□□□□ -1.57
TSKU-204ENST00000533752 MT4P47944 62 aa5.22□□□□□ -1.57
TSKU-204ENST00000533752 HMCN1Q96RW7 5635 aa5.17□□□□□ -1.58
TSKU-204ENST00000533752 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
TSKU-204ENST00000533752 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
TSKU-204ENST00000533752 KRTAP5-5Q701N2 237 aaPredicted RBP5.11□□□□□ -1.59
TSKU-204ENST00000533752 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
TSKU-204ENST00000533752 KTN1-AS1Q86SY8 53 aa5.06□□□□□ -1.6
TSKU-204ENST00000533752 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
TSKU-204ENST00000533752 KRTAP5-10Q6L8G5 202 aa5□□□□□ -1.61
TSKU-204ENST00000533752 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
TSKU-204ENST00000533752 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
TSKU-204ENST00000533752 KRTAP20-2Q3LI61 65 aa4.95□□□□□ -1.62
TSKU-204ENST00000533752 KRTAP5-7Q6L8G8 165 aa4.87□□□□□ -1.63
TSKU-204ENST00000533752 MT1AP04731 61 aa4.82□□□□□ -1.64
TSKU-204ENST00000533752 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
TSKU-204ENST00000533752 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
TSKU-204ENST00000533752 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
TSKU-204ENST00000533752 KRTAP5-3Q6L8H2 238 aa4.78□□□□□ -1.64
TSKU-204ENST00000533752 KRTAP6-1Q3LI64 71 aa4.75□□□□□ -1.65
TSKU-204ENST00000533752 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
TSKU-204ENST00000533752 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
TSKU-204ENST00000533752 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
TSKU-204ENST00000533752 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
TSKU-204ENST00000533752 MT3P25713 68 aa4.41□□□□□ -1.7
TSKU-204ENST00000533752 AHNAKQ09666 5890 aaKnown RBP4.36□□□□□ -1.71
TSKU-204ENST00000533752 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
TSKU-204ENST00000533752 KRTAP5-8O75690 187 aa4.31□□□□□ -1.72
TSKU-204ENST00000533752 MUC5ACP98088 5654 aa4.28□□□□□ -1.72
TSKU-204ENST00000533752 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
TSKU-204ENST00000533752 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
TSKU-204ENST00000533752 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
TSKU-204ENST00000533752 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
TSKU-204ENST00000533752 LUZP6Q538Z0 58 aa4□□□□□ -1.77
TSKU-204ENST00000533752 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
TSKU-204ENST00000533752 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
TSKU-204ENST00000533752 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
TSKU-204ENST00000533752 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
TSKU-204ENST00000533752 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
TSKU-204ENST00000533752 H3BS24 57 aa3.69□□□□□ -1.82
TSKU-204ENST00000533752 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
TSKU-204ENST00000533752 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
TSKU-204ENST00000533752 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
TSKU-204ENST00000533752 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
TSKU-204ENST00000533752 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
TSKU-204ENST00000533752 INE1O15225 51 aa3.35□□□□□ -1.87
TSKU-204ENST00000533752 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
TSKU-204ENST00000533752 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
TSKU-204ENST00000533752 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
TSKU-204ENST00000533752 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
TSKU-204ENST00000533752 PRM1P04553 51 aa2.73□□□□□ -1.97
TSKU-204ENST00000533752 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
TSKU-204ENST00000533752 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
TSKU-204ENST00000533752 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms