RNA–Protein interactions for RNA: ENST00000533646.1

TM7SF2-223, Transcript of transmembrane 7 superfamily member 2, human

TSL 2

Gene TM7SF2, Length 486 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM7SF2-223	ENST00000533646	LCE1D	Q5T752	114 aa		7.13	□□□□□ -1.27
TM7SF2-223	ENST00000533646	TMEM258	P61165	79 aa		7.1	□□□□□ -1.27
TM7SF2-223	ENST00000533646	MT4	P47944	62 aa		7.08	□□□□□ -1.28
TM7SF2-223	ENST00000533646	LCE4A	Q5TA78	99 aa		7.05	□□□□□ -1.28
TM7SF2-223	ENST00000533646	UQCR11	O14957	56 aa		7.03	□□□□□ -1.28
TM7SF2-223	ENST00000533646	HMCN1	Q96RW7	5635 aa		6.99	□□□□□ -1.29
TM7SF2-223	ENST00000533646	KRTAP12-3	P60328	96 aa		6.99	□□□□□ -1.29
TM7SF2-223	ENST00000533646	KRTAP4-7	Q9BYR0	210 aa		6.99	□□□□□ -1.29
TM7SF2-223	ENST00000533646	MIR22HG	Q0VDD5	57 aa		6.9	□□□□□ -1.3
TM7SF2-223	ENST00000533646	KRTAP5-4	Q6L8H1	288 aa		6.9	□□□□□ -1.3
TM7SF2-223	ENST00000533646	KRTAP4-6	Q9BYQ5	205 aa		6.86	□□□□□ -1.31
TM7SF2-223	ENST00000533646	KRTAP25-1	Q3LHN0	102 aa		6.79	□□□□□ -1.32
TM7SF2-223	ENST00000533646		V9GYY9	64 aa		6.78	□□□□□ -1.32
TM7SF2-223	ENST00000533646	PSPHP1	O15172	72 aa		6.77	□□□□□ -1.33
TM7SF2-223	ENST00000533646	AHNAK2	Q8IVF2	5795 aa		6.76	□□□□□ -1.33
TM7SF2-223	ENST00000533646		K7ERS5	55 aa		6.75	□□□□□ -1.33
TM7SF2-223	ENST00000533646		Q1T7F1	81 aa		6.64	□□□□□ -1.35
TM7SF2-223	ENST00000533646	LOC100996750	A0A140TA64	210 aa		6.62	□□□□□ -1.35
TM7SF2-223	ENST00000533646	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.62	□□□□□ -1.35
TM7SF2-223	ENST00000533646	KRTAP5-10	Q6L8G5	202 aa		6.61	□□□□□ -1.35
TM7SF2-223	ENST00000533646	KRTAP20-2	Q3LI61	65 aa		6.56	□□□□□ -1.36
TM7SF2-223	ENST00000533646	PCP4	P48539	62 aa		6.53	□□□□□ -1.36
TM7SF2-223	ENST00000533646		A6NED7	52 aa		6.5	□□□□□ -1.37
TM7SF2-223	ENST00000533646	KRTAP15-1	Q3LI76	137 aa		6.5	□□□□□ -1.37
TM7SF2-223	ENST00000533646	KRTAP12-4	P60329	112 aa		6.48	□□□□□ -1.37
TM7SF2-223	ENST00000533646	SPRR5	A0A1B0GTR4	108 aa		6.47	□□□□□ -1.37
TM7SF2-223	ENST00000533646	KRTAP23-1	A1A580	65 aa		6.47	□□□□□ -1.37
TM7SF2-223	ENST00000533646	KRTAP5-3	Q6L8H2	238 aa		6.47	□□□□□ -1.37
TM7SF2-223	ENST00000533646	RPS28	P62857	69 aa	Known RBP	6.44	□□□□□ -1.38
TM7SF2-223	ENST00000533646	KRTAP19-4	Q3LI73	84 aa		6.44	□□□□□ -1.38
TM7SF2-223	ENST00000533646	LCE3C	Q5T5A8	94 aa		6.42	□□□□□ -1.38
TM7SF2-223	ENST00000533646	SYNE1	Q8NF91	8797 aa	Known RBP	6.41	□□□□□ -1.38
TM7SF2-223	ENST00000533646	CDC42SE1	Q9NRR8	79 aa		6.4	□□□□□ -1.38
TM7SF2-223	ENST00000533646	KRTAP5-7	Q6L8G8	165 aa		6.34	□□□□□ -1.39
TM7SF2-223	ENST00000533646	ROMO1	P60602	79 aa		6.3	□□□□□ -1.4
TM7SF2-223	ENST00000533646	KRTAP6-1	Q3LI64	71 aa		6.17	□□□□□ -1.42
TM7SF2-223	ENST00000533646	MT1A	P04731	61 aa		6.16	□□□□□ -1.42
TM7SF2-223	ENST00000533646	KRTAP9-6	A8MVA2	160 aa		6.09	□□□□□ -1.43
TM7SF2-223	ENST00000533646	KRTAP5-2	Q701N4	177 aa		6.03	□□□□□ -1.44
TM7SF2-223	ENST00000533646	KRTAP4-11	Q9BYQ6	195 aa		6	□□□□□ -1.45
TM7SF2-223	ENST00000533646	KRTAP9-4	Q9BYQ2	154 aa		5.98	□□□□□ -1.45
TM7SF2-223	ENST00000533646	KRTAP6-2	Q3LI66	62 aa		5.91	□□□□□ -1.46
TM7SF2-223	ENST00000533646	KRTAP5-8	O75690	187 aa		5.79	□□□□□ -1.48
TM7SF2-223	ENST00000533646	OBSCN	Q5VST9	7968 aa		5.68	□□□□□ -1.5
TM7SF2-223	ENST00000533646	MT3	P25713	68 aa		5.64	□□□□□ -1.51
TM7SF2-223	ENST00000533646	BRK1	Q8WUW1	75 aa		5.59	□□□□□ -1.51
TM7SF2-223	ENST00000533646	AHNAK	Q09666	5890 aa	Known RBP	5.56	□□□□□ -1.52
TM7SF2-223	ENST00000533646	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.56	□□□□□ -1.52
TM7SF2-223	ENST00000533646	MUC5AC	P98088	5654 aa		5.54	□□□□□ -1.52
TM7SF2-223	ENST00000533646	KRTAP9-9	Q9BYP9	154 aa		5.52	□□□□□ -1.53
TM7SF2-223	ENST00000533646	KRTAP5-1	Q6L8H4	278 aa		5.44	□□□□□ -1.54
TM7SF2-223	ENST00000533646	PMAIP1	Q13794	54 aa		5.3	□□□□□ -1.56
TM7SF2-223	ENST00000533646	LCE1E	Q5T753	118 aa		5.14	□□□□□ -1.59
TM7SF2-223	ENST00000533646	PRAC1	Q96KF2	57 aa		5.1	□□□□□ -1.59
TM7SF2-223	ENST00000533646	PRO0628	Q9UI54	55 aa		5.06	□□□□□ -1.6
TM7SF2-223	ENST00000533646	LCE1B	Q5T7P3	118 aa		4.98	□□□□□ -1.61
TM7SF2-223	ENST00000533646	KRTAP4-2	Q9BYR5	136 aa		4.92	□□□□□ -1.62
TM7SF2-223	ENST00000533646	KTN1-AS1	Q86SY8	53 aa		4.8	□□□□□ -1.64
TM7SF2-223	ENST00000533646	LCE1C	Q5T751	118 aa		4.79	□□□□□ -1.64
TM7SF2-223	ENST00000533646	LCE3D	Q9BYE3	92 aa		4.62	□□□□□ -1.67
TM7SF2-223	ENST00000533646	KRTAP4-12	Q9BQ66	201 aa		4.57	□□□□□ -1.68
TM7SF2-223	ENST00000533646	SVIP	Q8NHG7	77 aa		4.53	□□□□□ -1.68
TM7SF2-223	ENST00000533646	LUZP6	Q538Z0	58 aa		4.38	□□□□□ -1.71
TM7SF2-223	ENST00000533646	LCE3E	Q5T5B0	92 aa		4.33	□□□□□ -1.72
TM7SF2-223	ENST00000533646	KRTAP5-11	Q6L8G4	156 aa		4.33	□□□□□ -1.72
TM7SF2-223	ENST00000533646	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.32	□□□□□ -1.72
TM7SF2-223	ENST00000533646	LCE1F	Q5T754	118 aa		4.2	□□□□□ -1.74
TM7SF2-223	ENST00000533646	KRTAP21-2	Q3LI59	83 aa		4.04	□□□□□ -1.76
TM7SF2-223	ENST00000533646	PHGR1	C9JFL3	82 aa		3.89	□□□□□ -1.79
TM7SF2-223	ENST00000533646	KRTAP4-4	Q9BYR3	166 aa		3.81	□□□□□ -1.8
TM7SF2-223	ENST00000533646	NDUFAF8	A1L188	74 aa		3.58	□□□□□ -1.84
TM7SF2-223	ENST00000533646	MUC19	Q7Z5P9	8384 aa		3.49	□□□□□ -1.85
TM7SF2-223	ENST00000533646	PRM1	P04553	51 aa		3.25	□□□□□ -1.89
TM7SF2-223	ENST00000533646	INE1	O15225	51 aa		2.93	□□□□□ -1.94
TM7SF2-223	ENST00000533646	KRTAP21-1	Q3LI58	79 aa		2.91	□□□□□ -1.94
TM7SF2-223	ENST00000533646		A0A0A0MQY5	61 aa		2.9	□□□□□ -1.95
TM7SF2-223	ENST00000533646	MUC16	Q8WXI7	14507 aa		2.52	□□□□□ -2.01
TM7SF2-223	ENST00000533646		H3BS24	57 aa		1.79	□□□□□ -2.12

Retrieved 78 of 20,778 RNA–protein pairs in 89 ms