RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 PMAIP1Q13794 54 aa6.3□□□□□ -1.4
NXF1-216ENST00000533499 KRTAP19-3Q7Z4W3 81 aa6.28□□□□□ -1.4
NXF1-216ENST00000533499 PP632Q6XCG6 107 aa6.25□□□□□ -1.41
NXF1-216ENST00000533499 MT1LQ93083 61 aa6.23□□□□□ -1.41
NXF1-216ENST00000533499 KRTAP20-1Q3LI63 56 aa6.21□□□□□ -1.42
NXF1-216ENST00000533499 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
NXF1-216ENST00000533499 MT1GP13640 62 aa6.19□□□□□ -1.42
NXF1-216ENST00000533499 PRO0628Q9UI54 55 aa6.19□□□□□ -1.42
NXF1-216ENST00000533499 KRTAP2-3P0C7H8 128 aa6.14□□□□□ -1.43
NXF1-216ENST00000533499 KRTAP2-4Q9BYR9 128 aa6.14□□□□□ -1.43
NXF1-216ENST00000533499 MT1MQ8N339 61 aa6.1□□□□□ -1.43
NXF1-216ENST00000533499 LCE3BQ5TA77 95 aa6.08□□□□□ -1.44
NXF1-216ENST00000533499 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
NXF1-216ENST00000533499 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
NXF1-216ENST00000533499 KRTAP4-3Q9BYR4 195 aa6□□□□□ -1.45
NXF1-216ENST00000533499 PRAC1Q96KF2 57 aa5.97□□□□□ -1.45
NXF1-216ENST00000533499 KRTAP2-2Q9BYT5 123 aa5.97□□□□□ -1.45
NXF1-216ENST00000533499 KRTAP2-1Q9BYU5 128 aa5.97□□□□□ -1.45
NXF1-216ENST00000533499 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
NXF1-216ENST00000533499 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
NXF1-216ENST00000533499 KRTAP4-6Q9BYQ5 205 aa5.92□□□□□ -1.46
NXF1-216ENST00000533499 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
NXF1-216ENST00000533499 LCE3CQ5T5A8 94 aa5.87□□□□□ -1.47
NXF1-216ENST00000533499 KTN1-AS1Q86SY8 53 aa5.82□□□□□ -1.48
NXF1-216ENST00000533499 SVIPQ8NHG7 77 aa5.64□□□□□ -1.51
NXF1-216ENST00000533499 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
NXF1-216ENST00000533499 LCE4AQ5TA78 99 aa5.55□□□□□ -1.52
NXF1-216ENST00000533499 MT4P47944 62 aa5.51□□□□□ -1.53
NXF1-216ENST00000533499 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
NXF1-216ENST00000533499 KRTAP5-5Q701N2 237 aaPredicted RBP5.48□□□□□ -1.53
NXF1-216ENST00000533499 KRTAP5-4Q6L8H1 288 aa5.47□□□□□ -1.53
NXF1-216ENST00000533499 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
NXF1-216ENST00000533499 HMCN1Q96RW7 5635 aa5.33□□□□□ -1.56
NXF1-216ENST00000533499 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
NXF1-216ENST00000533499 MT1AP04731 61 aa5.31□□□□□ -1.56
NXF1-216ENST00000533499 KRTAP12-4P60329 112 aa5.31□□□□□ -1.56
NXF1-216ENST00000533499 KRTAP6-1Q3LI64 71 aa5.26□□□□□ -1.57
NXF1-216ENST00000533499 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
NXF1-216ENST00000533499 KRTAP20-2Q3LI61 65 aa5.19□□□□□ -1.58
NXF1-216ENST00000533499 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
NXF1-216ENST00000533499 GPR98Q8WXG9 6306 aa5.04□□□□□ -1.6
NXF1-216ENST00000533499 AHNAK2Q8IVF2 5795 aa5.01□□□□□ -1.61
NXF1-216ENST00000533499 KRTAP5-3Q6L8H2 238 aa4.98□□□□□ -1.61
NXF1-216ENST00000533499 LUZP6Q538Z0 58 aa4.97□□□□□ -1.61
NXF1-216ENST00000533499 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
NXF1-216ENST00000533499 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
NXF1-216ENST00000533499 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
NXF1-216ENST00000533499 MT3P25713 68 aa4.85□□□□□ -1.63
NXF1-216ENST00000533499 KRTAP4-12Q9BQ66 201 aa4.82□□□□□ -1.64
NXF1-216ENST00000533499 KRTAP5-10Q6L8G5 202 aa4.77□□□□□ -1.65
NXF1-216ENST00000533499 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
NXF1-216ENST00000533499 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
NXF1-216ENST00000533499 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
NXF1-216ENST00000533499 KRTAP5-7Q6L8G8 165 aa4.51□□□□□ -1.69
NXF1-216ENST00000533499 NDUFAF8A1L188 74 aa4.47□□□□□ -1.69
NXF1-216ENST00000533499 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
NXF1-216ENST00000533499 LCE3DQ9BYE3 92 aa4.34□□□□□ -1.71
NXF1-216ENST00000533499 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
NXF1-216ENST00000533499 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
NXF1-216ENST00000533499 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
NXF1-216ENST00000533499 LCE3EQ5T5B0 92 aa4.16□□□□□ -1.74
NXF1-216ENST00000533499 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
NXF1-216ENST00000533499 H3BS24 57 aa4.09□□□□□ -1.75
NXF1-216ENST00000533499 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
NXF1-216ENST00000533499 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
NXF1-216ENST00000533499 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
NXF1-216ENST00000533499 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
NXF1-216ENST00000533499 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
NXF1-216ENST00000533499 INE1O15225 51 aa3.61□□□□□ -1.83
NXF1-216ENST00000533499 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
NXF1-216ENST00000533499 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
NXF1-216ENST00000533499 PRM1P04553 51 aa3.42□□□□□ -1.86
NXF1-216ENST00000533499 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
NXF1-216ENST00000533499 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
NXF1-216ENST00000533499 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
NXF1-216ENST00000533499 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
NXF1-216ENST00000533499 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
NXF1-216ENST00000533499 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms