RNA–Protein interactions for RNA: ENST00000533409.1

MS4A6A-218, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 3

Gene MS4A6A, Length 682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-218ENST00000533409 SPATA8Q6RVD6 105 aa1.8□□□□□ -2.12
MS4A6A-218ENST00000533409 HMCN1Q96RW7 5635 aa1.78□□□□□ -2.12
MS4A6A-218ENST00000533409 FLGP20930 4061 aaPredicted RBP1.76□□□□□ -2.13
MS4A6A-218ENST00000533409 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
MS4A6A-218ENST00000533409 PP632Q6XCG6 107 aa1.75□□□□□ -2.13
MS4A6A-218ENST00000533409 PLAC4Q8WY50 150 aa1.75□□□□□ -2.13
MS4A6A-218ENST00000533409 FAT4Q6V0I7 4981 aa1.73□□□□□ -2.13
MS4A6A-218ENST00000533409 MT2AP02795 61 aa1.73□□□□□ -2.13
MS4A6A-218ENST00000533409 LCE3EQ5T5B0 92 aa1.73□□□□□ -2.13
MS4A6A-218ENST00000533409 SPRR2GQ9BYE4 73 aa1.73□□□□□ -2.13
MS4A6A-218ENST00000533409 KRTAP12-2P59991 146 aa1.72□□□□□ -2.13
MS4A6A-218ENST00000533409 KRTAP9-6A8MVA2 160 aa1.71□□□□□ -2.14
MS4A6A-218ENST00000533409 MT1FP04733 61 aa1.7□□□□□ -2.14
MS4A6A-218ENST00000533409 A0A0D9SG42 100 aa1.68□□□□□ -2.14
MS4A6A-218ENST00000533409 KRTAP10-5P60370 271 aa1.68□□□□□ -2.14
MS4A6A-218ENST00000533409 KRTAP19-8Q3LI54 63 aa1.67□□□□□ -2.14
MS4A6A-218ENST00000533409 KRTAP12-1P59990 96 aa1.66□□□□□ -2.14
MS4A6A-218ENST00000533409 KRTAP6-3Q3LI67 103 aa1.66□□□□□ -2.14
MS4A6A-218ENST00000533409 TNP1P09430 55 aa1.61□□□□□ -2.15
MS4A6A-218ENST00000533409 KRTAP19-6Q3LI70 58 aa1.6□□□□□ -2.15
MS4A6A-218ENST00000533409 CRCT1Q9UGL9 99 aa1.6□□□□□ -2.15
MS4A6A-218ENST00000533409 MT1BP07438 61 aa1.59□□□□□ -2.15
MS4A6A-218ENST00000533409 LCE3DQ9BYE3 92 aa1.57□□□□□ -2.16
MS4A6A-218ENST00000533409 MT1XP80297 61 aa1.55□□□□□ -2.16
MS4A6A-218ENST00000533409 C10orf95Q9H7T3 257 aa1.54□□□□□ -2.16
MS4A6A-218ENST00000533409 FSIP2Q5CZC0 6907 aa1.53□□□□□ -2.17
MS4A6A-218ENST00000533409 USH2AO75445 5202 aa1.52□□□□□ -2.17
MS4A6A-218ENST00000533409 KRTAP12-4P60329 112 aa1.49□□□□□ -2.17
MS4A6A-218ENST00000533409 KRTAP8-1Q8IUC2 63 aa1.49□□□□□ -2.17
MS4A6A-218ENST00000533409 SSPOA2VEC9 5147 aa1.47□□□□□ -2.17
MS4A6A-218ENST00000533409 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
MS4A6A-218ENST00000533409 KRTAP12-3P60328 96 aa1.44□□□□□ -2.18
MS4A6A-218ENST00000533409 LCE3AQ5TA76 89 aa1.44□□□□□ -2.18
MS4A6A-218ENST00000533409 SPRR2FQ96RM1 72 aa1.42□□□□□ -2.18
MS4A6A-218ENST00000533409 MT1GP13640 62 aa1.39□□□□□ -2.19
MS4A6A-218ENST00000533409 KRTAP19-5Q3LI72 72 aa1.39□□□□□ -2.19
MS4A6A-218ENST00000533409 MACF1Q9UPN3 7388 aaKnown RBP1.38□□□□□ -2.19
MS4A6A-218ENST00000533409 MT1EP04732 61 aa1.37□□□□□ -2.19
MS4A6A-218ENST00000533409 SPRR2EP22531 72 aa1.37□□□□□ -2.19
MS4A6A-218ENST00000533409 SPRR2BP35325 72 aa1.37□□□□□ -2.19
MS4A6A-218ENST00000533409 SPRR2AP35326 72 aa1.37□□□□□ -2.19
MS4A6A-218ENST00000533409 KRTAP19-7Q3SYF9 63 aa1.37□□□□□ -2.19
MS4A6A-218ENST00000533409 KRTAP19-3Q7Z4W3 81 aa1.36□□□□□ -2.19
MS4A6A-218ENST00000533409 MT1LQ93083 61 aa1.34□□□□□ -2.19
MS4A6A-218ENST00000533409 SPRR2DP22532 72 aa1.33□□□□□ -2.2
MS4A6A-218ENST00000533409 LCE1CQ5T751 118 aa1.33□□□□□ -2.2
MS4A6A-218ENST00000533409 LCE1BQ5T7P3 118 aa1.33□□□□□ -2.2
MS4A6A-218ENST00000533409 SYNE2Q8WXH0 6885 aaKnown RBP1.32□□□□□ -2.2
MS4A6A-218ENST00000533409 KMT2DO14686 5537 aa1.32□□□□□ -2.2
MS4A6A-218ENST00000533409 KRTAP5-5Q701N2 237 aaPredicted RBP1.32□□□□□ -2.2
MS4A6A-218ENST00000533409 KRTAP2-3P0C7H8 128 aa1.31□□□□□ -2.2
MS4A6A-218ENST00000533409 KRTAP2-4Q9BYR9 128 aa1.31□□□□□ -2.2
MS4A6A-218ENST00000533409 MT1MQ8N339 61 aa1.29□□□□□ -2.2
MS4A6A-218ENST00000533409 MDN1Q9NU22 5596 aa1.28□□□□□ -2.2
MS4A6A-218ENST00000533409 MUC12Q9UKN1 5478 aa1.27□□□□□ -2.21
MS4A6A-218ENST00000533409 KRTAP20-1Q3LI63 56 aa1.27□□□□□ -2.21
MS4A6A-218ENST00000533409 KRTAP2-1Q9BYU5 128 aa1.27□□□□□ -2.21
MS4A6A-218ENST00000533409 NEBP20929 6669 aa1.25□□□□□ -2.21
MS4A6A-218ENST00000533409 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
MS4A6A-218ENST00000533409 DSTQ03001 7570 aaKnown RBP1.18□□□□□ -2.22
MS4A6A-218ENST00000533409 MT1AP04731 61 aa1.17□□□□□ -2.22
MS4A6A-218ENST00000533409 MT4P47944 62 aa1.11□□□□□ -2.23
MS4A6A-218ENST00000533409 KRTAP6-1Q3LI64 71 aa1.1□□□□□ -2.23
MS4A6A-218ENST00000533409 KRTAP20-2Q3LI61 65 aa1.08□□□□□ -2.24
MS4A6A-218ENST00000533409 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
MS4A6A-218ENST00000533409 KRTAP5-7Q6L8G8 165 aa1.03□□□□□ -2.24
MS4A6A-218ENST00000533409 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
MS4A6A-218ENST00000533409 GPR98Q8WXG9 6306 aa0.95□□□□□ -2.26
MS4A6A-218ENST00000533409 KRTAP21-2Q3LI59 83 aa0.95□□□□□ -2.26
MS4A6A-218ENST00000533409 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
MS4A6A-218ENST00000533409 AHNAK2Q8IVF2 5795 aa0.93□□□□□ -2.26
MS4A6A-218ENST00000533409 PRM1P04553 51 aa0.81□□□□□ -2.28
MS4A6A-218ENST00000533409 MUC5ACP98088 5654 aa0.79□□□□□ -2.28
MS4A6A-218ENST00000533409 AHNAKQ09666 5890 aaKnown RBP0.75□□□□□ -2.29
MS4A6A-218ENST00000533409 MUC5BQ9HC84 5762 aaPredicted RBP0.75□□□□□ -2.29
MS4A6A-218ENST00000533409 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
MS4A6A-218ENST00000533409 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
MS4A6A-218ENST00000533409 MUC16Q8WXI7 14507 aa0.42□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 70.6 ms