RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-215	ENST00000533408	MUC12	Q9UKN1	5478 aa		7.6	□□□□□ -1.19
PTP4A2-215	ENST00000533408	MT1G	P13640	62 aa		7.56	□□□□□ -1.2
PTP4A2-215	ENST00000533408	SPRR2D	P22532	72 aa		7.53	□□□□□ -1.2
PTP4A2-215	ENST00000533408	KRTAP19-4	Q3LI73	84 aa		7.53	□□□□□ -1.2
PTP4A2-215	ENST00000533408	MT1L	Q93083	61 aa		7.53	□□□□□ -1.2
PTP4A2-215	ENST00000533408	NEB	P20929	6669 aa		7.53	□□□□□ -1.2
PTP4A2-215	ENST00000533408	MDN1	Q9NU22	5596 aa		7.52	□□□□□ -1.21
PTP4A2-215	ENST00000533408	LCE5A	Q5TCM9	118 aa		7.52	□□□□□ -1.21
PTP4A2-215	ENST00000533408	KRTAP15-1	Q3LI76	137 aa		7.46	□□□□□ -1.22
PTP4A2-215	ENST00000533408	KRTAP2-3	P0C7H8	128 aa		7.38	□□□□□ -1.23
PTP4A2-215	ENST00000533408	KRTAP2-4	Q9BYR9	128 aa		7.38	□□□□□ -1.23
PTP4A2-215	ENST00000533408	KRTAP20-1	Q3LI63	56 aa		7.37	□□□□□ -1.23
PTP4A2-215	ENST00000533408	MT1M	Q8N339	61 aa		7.35	□□□□□ -1.23
PTP4A2-215	ENST00000533408	KTN1-AS1	Q86SY8	53 aa		7.34	□□□□□ -1.23
PTP4A2-215	ENST00000533408	PRAC1	Q96KF2	57 aa		7.27	□□□□□ -1.25
PTP4A2-215	ENST00000533408	LCE3B	Q5TA77	95 aa		7.26	□□□□□ -1.25
PTP4A2-215	ENST00000533408	KRTAP2-2	Q9BYT5	123 aa		7.19	□□□□□ -1.26
PTP4A2-215	ENST00000533408	KRTAP2-1	Q9BYU5	128 aa		7.19	□□□□□ -1.26
PTP4A2-215	ENST00000533408	LCE3C	Q5T5A8	94 aa		7.18	□□□□□ -1.26
PTP4A2-215	ENST00000533408	KRTAP4-7	Q9BYR0	210 aa		7.1	□□□□□ -1.27
PTP4A2-215	ENST00000533408	KRTAP4-3	Q9BYR4	195 aa		7.06	□□□□□ -1.28
PTP4A2-215	ENST00000533408	SVIP	Q8NHG7	77 aa		6.95	□□□□□ -1.3
PTP4A2-215	ENST00000533408	LOC100996750	A0A140TA64	210 aa		6.9	□□□□□ -1.3
PTP4A2-215	ENST00000533408	KRTAP4-6	Q9BYQ5	205 aa		6.9	□□□□□ -1.3
PTP4A2-215	ENST00000533408	DST	Q03001	7570 aa	Known RBP	6.85	□□□□□ -1.31
PTP4A2-215	ENST00000533408	LCE4A	Q5TA78	99 aa		6.74	□□□□□ -1.33
PTP4A2-215	ENST00000533408	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.66	□□□□□ -1.34
PTP4A2-215	ENST00000533408	KRTAP5-4	Q6L8H1	288 aa		6.65	□□□□□ -1.34
PTP4A2-215	ENST00000533408	KRTAP9-6	A8MVA2	160 aa		6.61	□□□□□ -1.35
PTP4A2-215	ENST00000533408	SPRR5	A0A1B0GTR4	108 aa		6.58	□□□□□ -1.36
PTP4A2-215	ENST00000533408	KRTAP4-9	Q9BYQ8	210 aa		6.51	□□□□□ -1.37
PTP4A2-215	ENST00000533408	MT4	P47944	62 aa		6.48	□□□□□ -1.37
PTP4A2-215	ENST00000533408	KRTAP12-4	P60329	112 aa		6.48	□□□□□ -1.37
PTP4A2-215	ENST00000533408	LCE1D	Q5T752	114 aa		6.46	□□□□□ -1.38
PTP4A2-215	ENST00000533408	MT1A	P04731	61 aa		6.45	□□□□□ -1.38
PTP4A2-215	ENST00000533408	KRTAP6-1	Q3LI64	71 aa		6.3	□□□□□ -1.4
PTP4A2-215	ENST00000533408	LUZP6	Q538Z0	58 aa		6.29	□□□□□ -1.4
PTP4A2-215	ENST00000533408	KRTAP20-2	Q3LI61	65 aa		6.23	□□□□□ -1.41
PTP4A2-215	ENST00000533408	KRTAP9-4	Q9BYQ2	154 aa		6.18	□□□□□ -1.42
PTP4A2-215	ENST00000533408	HMCN1	Q96RW7	5635 aa		6.17	□□□□□ -1.42
PTP4A2-215	ENST00000533408	SYNE1	Q8NF91	8797 aa	Known RBP	6.06	□□□□□ -1.44
PTP4A2-215	ENST00000533408	KRTAP5-3	Q6L8H2	238 aa		6	□□□□□ -1.45
PTP4A2-215	ENST00000533408	MT3	P25713	68 aa		5.93	□□□□□ -1.46
PTP4A2-215	ENST00000533408	KRTAP6-2	Q3LI66	62 aa		5.93	□□□□□ -1.46
PTP4A2-215	ENST00000533408	KRTAP5-2	Q701N4	177 aa		5.92	□□□□□ -1.46
PTP4A2-215	ENST00000533408	KRTAP4-12	Q9BQ66	201 aa		5.85	□□□□□ -1.47
PTP4A2-215	ENST00000533408	KRTAP9-9	Q9BYP9	154 aa		5.82	□□□□□ -1.48
PTP4A2-215	ENST00000533408	GPR98	Q8WXG9	6306 aa		5.75	□□□□□ -1.49
PTP4A2-215	ENST00000533408	KRTAP5-10	Q6L8G5	202 aa		5.68	□□□□□ -1.5
PTP4A2-215	ENST00000533408	AHNAK2	Q8IVF2	5795 aa		5.67	□□□□□ -1.5
PTP4A2-215	ENST00000533408	KRTAP4-11	Q9BYQ6	195 aa		5.56	□□□□□ -1.52
PTP4A2-215	ENST00000533408	NDUFAF8	A1L188	74 aa		5.54	□□□□□ -1.52
PTP4A2-215	ENST00000533408	KRTAP5-7	Q6L8G8	165 aa		5.41	□□□□□ -1.54
PTP4A2-215	ENST00000533408	KRTAP4-2	Q9BYR5	136 aa		5.36	□□□□□ -1.55
PTP4A2-215	ENST00000533408	LCE3D	Q9BYE3	92 aa		5.34	□□□□□ -1.55
PTP4A2-215	ENST00000533408	KRTAP5-8	O75690	187 aa		5.31	□□□□□ -1.56
PTP4A2-215	ENST00000533408	LCE1E	Q5T753	118 aa		5.31	□□□□□ -1.56
PTP4A2-215	ENST00000533408	OBSCN	Q5VST9	7968 aa		5.19	□□□□□ -1.58
PTP4A2-215	ENST00000533408	KRTAP5-1	Q6L8H4	278 aa		5.18	□□□□□ -1.58
PTP4A2-215	ENST00000533408	LCE3E	Q5T5B0	92 aa		5.14	□□□□□ -1.59
PTP4A2-215	ENST00000533408		A0A0A0MQY5	61 aa		4.9	□□□□□ -1.63
PTP4A2-215	ENST00000533408	LCE1C	Q5T751	118 aa		4.9	□□□□□ -1.63
PTP4A2-215	ENST00000533408	LCE1B	Q5T7P3	118 aa		4.9	□□□□□ -1.63
PTP4A2-215	ENST00000533408		H3BS24	57 aa		4.85	□□□□□ -1.63
PTP4A2-215	ENST00000533408	MUC5AC	P98088	5654 aa		4.84	□□□□□ -1.63
PTP4A2-215	ENST00000533408	INE1	O15225	51 aa		4.71	□□□□□ -1.66
PTP4A2-215	ENST00000533408	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.55	□□□□□ -1.68
PTP4A2-215	ENST00000533408	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.52	□□□□□ -1.69
PTP4A2-215	ENST00000533408	AHNAK	Q09666	5890 aa	Known RBP	4.49	□□□□□ -1.69
PTP4A2-215	ENST00000533408	KRTAP5-11	Q6L8G4	156 aa		4.35	□□□□□ -1.71
PTP4A2-215	ENST00000533408	LCE1F	Q5T754	118 aa		4.17	□□□□□ -1.74
PTP4A2-215	ENST00000533408	PRM1	P04553	51 aa		4.15	□□□□□ -1.75
PTP4A2-215	ENST00000533408	KRTAP21-2	Q3LI59	83 aa		4.15	□□□□□ -1.75
PTP4A2-215	ENST00000533408	PHGR1	C9JFL3	82 aa		3.74	□□□□□ -1.81
PTP4A2-215	ENST00000533408	KRTAP4-4	Q9BYR3	166 aa		3.65	□□□□□ -1.83
PTP4A2-215	ENST00000533408	MUC19	Q7Z5P9	8384 aa		3.15	□□□□□ -1.91
PTP4A2-215	ENST00000533408	KRTAP21-1	Q3LI58	79 aa		2.56	□□□□□ -2
PTP4A2-215	ENST00000533408	MUC16	Q8WXI7	14507 aa		2.28	□□□□□ -2.04

Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms