RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 MIR22HGQ0VDD5 57 aa10.55□□□□□ -0.72
SSSCA1-207ENST00000533115 KRTAP4-3Q9BYR4 195 aa10.48□□□□□ -0.73
SSSCA1-207ENST00000533115 KRTAP12-3P60328 96 aa10.46□□□□□ -0.73
SSSCA1-207ENST00000533115 LCE4AQ5TA78 99 aa10.4□□□□□ -0.74
SSSCA1-207ENST00000533115 V9GYY9 64 aa10.4□□□□□ -0.74
SSSCA1-207ENST00000533115 LCE1DQ5T752 114 aa10.38□□□□□ -0.75
SSSCA1-207ENST00000533115 PSPHP1O15172 72 aa10.36□□□□□ -0.75
SSSCA1-207ENST00000533115 K7ERS5 55 aa10.35□□□□□ -0.75
SSSCA1-207ENST00000533115 KRTAP25-1Q3LHN0 102 aa10.35□□□□□ -0.75
SSSCA1-207ENST00000533115 Q1T7F1 81 aa10.33□□□□□ -0.76
SSSCA1-207ENST00000533115 MT4P47944 62 aa10.27□□□□□ -0.77
SSSCA1-207ENST00000533115 KRTAP4-7Q9BYR0 210 aa10.26□□□□□ -0.77
SSSCA1-207ENST00000533115 GPR98Q8WXG9 6306 aa10.25□□□□□ -0.77
SSSCA1-207ENST00000533115 HMCN1Q96RW7 5635 aa10.24□□□□□ -0.77
SSSCA1-207ENST00000533115 KRTAP5-4Q6L8H1 288 aa10.21□□□□□ -0.77
SSSCA1-207ENST00000533115 A6NED7 52 aa10.01□□□□□ -0.81
SSSCA1-207ENST00000533115 KRTAP4-6Q9BYQ5 205 aa9.99□□□□□ -0.81
SSSCA1-207ENST00000533115 KRTAP23-1A1A580 65 aa9.97□□□□□ -0.81
SSSCA1-207ENST00000533115 KRTAP19-4Q3LI73 84 aa9.89□□□□□ -0.83
SSSCA1-207ENST00000533115 KRTAP5-5Q701N2 237 aaPredicted RBP9.84□□□□□ -0.83
SSSCA1-207ENST00000533115 AHNAK2Q8IVF2 5795 aa9.83□□□□□ -0.84
SSSCA1-207ENST00000533115 CDC42SE1Q9NRR8 79 aa9.8□□□□□ -0.84
SSSCA1-207ENST00000533115 KRTAP15-1Q3LI76 137 aa9.79□□□□□ -0.84
SSSCA1-207ENST00000533115 RPS28P62857 69 aaKnown RBP9.78□□□□□ -0.84
SSSCA1-207ENST00000533115 LOC100996750A0A140TA64 210 aa9.72□□□□□ -0.85
SSSCA1-207ENST00000533115 ROMO1P60602 79 aa9.65□□□□□ -0.86
SSSCA1-207ENST00000533115 KRTAP20-2Q3LI61 65 aa9.64□□□□□ -0.87
SSSCA1-207ENST00000533115 LCE3CQ5T5A8 94 aa9.64□□□□□ -0.87
SSSCA1-207ENST00000533115 KRTAP5-10Q6L8G5 202 aa9.62□□□□□ -0.87
SSSCA1-207ENST00000533115 PCP4P48539 62 aa9.61□□□□□ -0.87
SSSCA1-207ENST00000533115 SPRR5A0A1B0GTR4 108 aa9.6□□□□□ -0.87
SSSCA1-207ENST00000533115 KRTAP12-4P60329 112 aa9.58□□□□□ -0.88
SSSCA1-207ENST00000533115 SYNE1Q8NF91 8797 aaKnown RBP9.43□□□□□ -0.9
SSSCA1-207ENST00000533115 KRTAP5-3Q6L8H2 238 aa9.41□□□□□ -0.9
SSSCA1-207ENST00000533115 KRTAP5-7Q6L8G8 165 aa9.24□□□□□ -0.93
SSSCA1-207ENST00000533115 MT1AP04731 61 aa9.18□□□□□ -0.94
SSSCA1-207ENST00000533115 KRTAP6-1Q3LI64 71 aa9.12□□□□□ -0.95
SSSCA1-207ENST00000533115 KRTAP9-6A8MVA2 160 aa9.09□□□□□ -0.95
SSSCA1-207ENST00000533115 KRTAP5-2Q701N4 177 aa8.96□□□□□ -0.98
SSSCA1-207ENST00000533115 KRTAP9-4Q9BYQ2 154 aa8.88□□□□□ -0.99
SSSCA1-207ENST00000533115 KRTAP4-11Q9BYQ6 195 aa8.78□□□□□ -1
SSSCA1-207ENST00000533115 KRTAP6-2Q3LI66 62 aa8.71□□□□□ -1.02
SSSCA1-207ENST00000533115 BRK1Q8WUW1 75 aa8.57□□□□□ -1.04
SSSCA1-207ENST00000533115 KRTAP5-8O75690 187 aa8.49□□□□□ -1.05
SSSCA1-207ENST00000533115 MT3P25713 68 aa8.4□□□□□ -1.06
SSSCA1-207ENST00000533115 OBSCNQ5VST9 7968 aa8.32□□□□□ -1.08
SSSCA1-207ENST00000533115 MUC5BQ9HC84 5762 aaPredicted RBP8.12□□□□□ -1.11
SSSCA1-207ENST00000533115 AHNAKQ09666 5890 aaKnown RBP8.05□□□□□ -1.12
SSSCA1-207ENST00000533115 PMAIP1Q13794 54 aa8.05□□□□□ -1.12
SSSCA1-207ENST00000533115 MUC5ACP98088 5654 aa8.05□□□□□ -1.12
SSSCA1-207ENST00000533115 KRTAP9-9Q9BYP9 154 aa8.04□□□□□ -1.12
SSSCA1-207ENST00000533115 KRTAP5-1Q6L8H4 278 aa8.02□□□□□ -1.13
SSSCA1-207ENST00000533115 PRAC1Q96KF2 57 aa7.78□□□□□ -1.16
SSSCA1-207ENST00000533115 LCE1EQ5T753 118 aa7.7□□□□□ -1.18
SSSCA1-207ENST00000533115 PRO0628Q9UI54 55 aa7.39□□□□□ -1.23
SSSCA1-207ENST00000533115 KRTAP4-2Q9BYR5 136 aa7.27□□□□□ -1.25
SSSCA1-207ENST00000533115 LCE1BQ5T7P3 118 aa7.25□□□□□ -1.25
SSSCA1-207ENST00000533115 LCE1CQ5T751 118 aa7.16□□□□□ -1.26
SSSCA1-207ENST00000533115 KTN1-AS1Q86SY8 53 aa7.1□□□□□ -1.27
SSSCA1-207ENST00000533115 LCE3DQ9BYE3 92 aa6.95□□□□□ -1.3
SSSCA1-207ENST00000533115 SVIPQ8NHG7 77 aa6.83□□□□□ -1.32
SSSCA1-207ENST00000533115 LUZP6Q538Z0 58 aa6.58□□□□□ -1.36
SSSCA1-207ENST00000533115 KRTAP4-12Q9BQ66 201 aa6.57□□□□□ -1.36
SSSCA1-207ENST00000533115 LCE3EQ5T5B0 92 aa6.55□□□□□ -1.36
SSSCA1-207ENST00000533115 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.51□□□□□ -1.37
SSSCA1-207ENST00000533115 KRTAP5-11Q6L8G4 156 aa6.47□□□□□ -1.37
SSSCA1-207ENST00000533115 LCE1FQ5T754 118 aa6.29□□□□□ -1.4
SSSCA1-207ENST00000533115 KRTAP21-2Q3LI59 83 aa6.01□□□□□ -1.45
SSSCA1-207ENST00000533115 PHGR1C9JFL3 82 aa5.6□□□□□ -1.51
SSSCA1-207ENST00000533115 KRTAP4-4Q9BYR3 166 aa5.49□□□□□ -1.53
SSSCA1-207ENST00000533115 NDUFAF8A1L188 74 aa5.18□□□□□ -1.58
SSSCA1-207ENST00000533115 MUC19Q7Z5P9 8384 aa5.11□□□□□ -1.59
SSSCA1-207ENST00000533115 PRM1P04553 51 aa4.93□□□□□ -1.62
SSSCA1-207ENST00000533115 KRTAP21-1Q3LI58 79 aa4.25□□□□□ -1.73
SSSCA1-207ENST00000533115 INE1O15225 51 aa4.14□□□□□ -1.75
SSSCA1-207ENST00000533115 A0A0A0MQY5 61 aa4.07□□□□□ -1.76
SSSCA1-207ENST00000533115 MUC16Q8WXI7 14507 aa3.68□□□□□ -1.82
SSSCA1-207ENST00000533115 H3BS24 57 aa3.22□□□□□ -1.89
Retrieved 78 of 20,778 RNA–protein pairs in 7.4 ms