RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 MT1LQ93083 61 aa5.29□□□□□ -1.56
NXF1-214ENST00000533048 KRTAP19-3Q7Z4W3 81 aa5.27□□□□□ -1.57
NXF1-214ENST00000533048 SPRR2EP22531 72 aa5.24□□□□□ -1.57
NXF1-214ENST00000533048 SPRR2BP35325 72 aa5.24□□□□□ -1.57
NXF1-214ENST00000533048 SPRR2AP35326 72 aa5.24□□□□□ -1.57
NXF1-214ENST00000533048 KRTAP19-4Q3LI73 84 aa5.23□□□□□ -1.57
NXF1-214ENST00000533048 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
NXF1-214ENST00000533048 MDN1Q9NU22 5596 aa5.22□□□□□ -1.57
NXF1-214ENST00000533048 MT1GP13640 62 aa5.21□□□□□ -1.58
NXF1-214ENST00000533048 SVIPQ8NHG7 77 aa5.19□□□□□ -1.58
NXF1-214ENST00000533048 NEBP20929 6669 aa5.18□□□□□ -1.58
NXF1-214ENST00000533048 MT1MQ8N339 61 aa5.13□□□□□ -1.59
NXF1-214ENST00000533048 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
NXF1-214ENST00000533048 SPRR2DP22532 72 aa5.06□□□□□ -1.6
NXF1-214ENST00000533048 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
NXF1-214ENST00000533048 KRTAP4-3Q9BYR4 195 aa4.97□□□□□ -1.61
NXF1-214ENST00000533048 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.63
NXF1-214ENST00000533048 DSTQ03001 7570 aaKnown RBP4.88□□□□□ -1.63
NXF1-214ENST00000533048 LCE3BQ5TA77 95 aa4.87□□□□□ -1.63
NXF1-214ENST00000533048 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
NXF1-214ENST00000533048 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
NXF1-214ENST00000533048 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
NXF1-214ENST00000533048 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
NXF1-214ENST00000533048 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
NXF1-214ENST00000533048 KRTAP2-2Q9BYT5 123 aa4.74□□□□□ -1.65
NXF1-214ENST00000533048 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
NXF1-214ENST00000533048 KRTAP5-5Q701N2 237 aaPredicted RBP4.69□□□□□ -1.66
NXF1-214ENST00000533048 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
NXF1-214ENST00000533048 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
NXF1-214ENST00000533048 MT1AP04731 61 aa4.52□□□□□ -1.69
NXF1-214ENST00000533048 LUZP6Q538Z0 58 aa4.52□□□□□ -1.69
NXF1-214ENST00000533048 KRTAP6-1Q3LI64 71 aa4.44□□□□□ -1.7
NXF1-214ENST00000533048 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
NXF1-214ENST00000533048 MT4P47944 62 aa4.36□□□□□ -1.71
NXF1-214ENST00000533048 KRTAP12-4P60329 112 aa4.36□□□□□ -1.71
NXF1-214ENST00000533048 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
NXF1-214ENST00000533048 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
NXF1-214ENST00000533048 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
NXF1-214ENST00000533048 KRTAP9-4Q9BYQ2 154 aa4.29□□□□□ -1.72
NXF1-214ENST00000533048 HMCN1Q96RW7 5635 aa4.28□□□□□ -1.72
NXF1-214ENST00000533048 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
NXF1-214ENST00000533048 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
NXF1-214ENST00000533048 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
NXF1-214ENST00000533048 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
NXF1-214ENST00000533048 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
NXF1-214ENST00000533048 MT3P25713 68 aa4.08□□□□□ -1.76
NXF1-214ENST00000533048 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
NXF1-214ENST00000533048 KRTAP5-10Q6L8G5 202 aa3.79□□□□□ -1.8
NXF1-214ENST00000533048 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
NXF1-214ENST00000533048 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
NXF1-214ENST00000533048 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
NXF1-214ENST00000533048 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
NXF1-214ENST00000533048 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
NXF1-214ENST00000533048 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
NXF1-214ENST00000533048 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
NXF1-214ENST00000533048 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
NXF1-214ENST00000533048 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
NXF1-214ENST00000533048 H3BS24 57 aa3.58□□□□□ -1.84
NXF1-214ENST00000533048 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
NXF1-214ENST00000533048 INE1O15225 51 aa3.54□□□□□ -1.84
NXF1-214ENST00000533048 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
NXF1-214ENST00000533048 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
NXF1-214ENST00000533048 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
NXF1-214ENST00000533048 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
NXF1-214ENST00000533048 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
NXF1-214ENST00000533048 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
NXF1-214ENST00000533048 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
NXF1-214ENST00000533048 PRM1P04553 51 aa3.05□□□□□ -1.92
NXF1-214ENST00000533048 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
NXF1-214ENST00000533048 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
NXF1-214ENST00000533048 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
NXF1-214ENST00000533048 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
NXF1-214ENST00000533048 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
NXF1-214ENST00000533048 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
NXF1-214ENST00000533048 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
NXF1-214ENST00000533048 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
NXF1-214ENST00000533048 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
NXF1-214ENST00000533048 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 164.5 ms