RNA–Protein interactions for RNA: ENST00000533023.5

MS4A6A-217, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 3 BASIC

Gene MS4A6A, Length 780 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-217ENST00000533023 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
MS4A6A-217ENST00000533023 LUZP6Q538Z0 58 aa3.48□□□□□ -1.85
MS4A6A-217ENST00000533023 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
MS4A6A-217ENST00000533023 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
MS4A6A-217ENST00000533023 SPINT4Q6UDR6 99 aa3.47□□□□□ -1.85
MS4A6A-217ENST00000533023 PRR15LQ9BU68 103 aa3.45□□□□□ -1.86
MS4A6A-217ENST00000533023 KRTAP8-1Q8IUC2 63 aa3.42□□□□□ -1.86
MS4A6A-217ENST00000533023 SPRR2FQ96RM1 72 aa3.41□□□□□ -1.86
MS4A6A-217ENST00000533023 MDN1Q9NU22 5596 aa3.4□□□□□ -1.87
MS4A6A-217ENST00000533023 Q1T7F1 81 aa3.36□□□□□ -1.87
MS4A6A-217ENST00000533023 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
MS4A6A-217ENST00000533023 UQCR11O14957 56 aa3.34□□□□□ -1.87
MS4A6A-217ENST00000533023 SPRR2EP22531 72 aa3.33□□□□□ -1.88
MS4A6A-217ENST00000533023 SPRR2BP35325 72 aa3.33□□□□□ -1.88
MS4A6A-217ENST00000533023 SPRR2AP35326 72 aa3.33□□□□□ -1.88
MS4A6A-217ENST00000533023 MIR22HGQ0VDD5 57 aa3.32□□□□□ -1.88
MS4A6A-217ENST00000533023 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
MS4A6A-217ENST00000533023 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
MS4A6A-217ENST00000533023 RPS28P62857 69 aaKnown RBP3.27□□□□□ -1.89
MS4A6A-217ENST00000533023 LCE3AQ5TA76 89 aa3.27□□□□□ -1.89
MS4A6A-217ENST00000533023 MT1EP04732 61 aa3.25□□□□□ -1.89
MS4A6A-217ENST00000533023 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
MS4A6A-217ENST00000533023 A6NED7 52 aa3.24□□□□□ -1.89
MS4A6A-217ENST00000533023 K7ERS5 55 aa3.24□□□□□ -1.89
MS4A6A-217ENST00000533023 KRTAP20-1Q3LI63 56 aa3.22□□□□□ -1.89
MS4A6A-217ENST00000533023 TNP1P09430 55 aa3.2□□□□□ -1.9
MS4A6A-217ENST00000533023 SPRR2DP22532 72 aa3.2□□□□□ -1.9
MS4A6A-217ENST00000533023 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
MS4A6A-217ENST00000533023 KRTAP19-3Q7Z4W3 81 aa3.16□□□□□ -1.9
MS4A6A-217ENST00000533023 KRTAP2-3P0C7H8 128 aa3.13□□□□□ -1.91
MS4A6A-217ENST00000533023 MT1LQ93083 61 aa3.13□□□□□ -1.91
MS4A6A-217ENST00000533023 KRTAP2-4Q9BYR9 128 aa3.13□□□□□ -1.91
MS4A6A-217ENST00000533023 CDC42SE1Q9NRR8 79 aa3.12□□□□□ -1.91
MS4A6A-217ENST00000533023 DSTQ03001 7570 aaKnown RBP3.1□□□□□ -1.91
MS4A6A-217ENST00000533023 KRTAP25-1Q3LHN0 102 aa3.09□□□□□ -1.91
MS4A6A-217ENST00000533023 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
MS4A6A-217ENST00000533023 KRTAP12-3P60328 96 aa3.08□□□□□ -1.92
MS4A6A-217ENST00000533023 PMAIP1Q13794 54 aa3.08□□□□□ -1.92
MS4A6A-217ENST00000533023 MT1MQ8N339 61 aa3.08□□□□□ -1.92
MS4A6A-217ENST00000533023 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
MS4A6A-217ENST00000533023 MT1GP13640 62 aa3.05□□□□□ -1.92
MS4A6A-217ENST00000533023 KRTAP2-1Q9BYU5 128 aa3.04□□□□□ -1.92
MS4A6A-217ENST00000533023 ROMO1P60602 79 aa3.03□□□□□ -1.92
MS4A6A-217ENST00000533023 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
MS4A6A-217ENST00000533023 PP632Q6XCG6 107 aa2.97□□□□□ -1.93
MS4A6A-217ENST00000533023 BRK1Q8WUW1 75 aa2.97□□□□□ -1.93
MS4A6A-217ENST00000533023 MT4P47944 62 aa2.83□□□□□ -1.96
MS4A6A-217ENST00000533023 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
MS4A6A-217ENST00000533023 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
MS4A6A-217ENST00000533023 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
MS4A6A-217ENST00000533023 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
MS4A6A-217ENST00000533023 KTN1-AS1Q86SY8 53 aa2.75□□□□□ -1.97
MS4A6A-217ENST00000533023 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
MS4A6A-217ENST00000533023 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
MS4A6A-217ENST00000533023 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
MS4A6A-217ENST00000533023 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
MS4A6A-217ENST00000533023 MT1AP04731 61 aa2.64□□□□□ -1.99
MS4A6A-217ENST00000533023 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
MS4A6A-217ENST00000533023 KRTAP12-4P60329 112 aa2.59□□□□□ -1.99
MS4A6A-217ENST00000533023 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
MS4A6A-217ENST00000533023 LCE1CQ5T751 118 aa2.56□□□□□ -2
MS4A6A-217ENST00000533023 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
MS4A6A-217ENST00000533023 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
MS4A6A-217ENST00000533023 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
MS4A6A-217ENST00000533023 KRTAP6-2Q3LI66 62 aa2.5□□□□□ -2.01
MS4A6A-217ENST00000533023 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
MS4A6A-217ENST00000533023 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
MS4A6A-217ENST00000533023 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
MS4A6A-217ENST00000533023 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
MS4A6A-217ENST00000533023 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
MS4A6A-217ENST00000533023 INE1O15225 51 aa2.09□□□□□ -2.07
MS4A6A-217ENST00000533023 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
MS4A6A-217ENST00000533023 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
MS4A6A-217ENST00000533023 PRM1P04553 51 aa1.62□□□□□ -2.15
MS4A6A-217ENST00000533023 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
MS4A6A-217ENST00000533023 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
MS4A6A-217ENST00000533023 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 61.7 ms