RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 SPINT4Q6UDR6 99 aa3.57□□□□□ -1.84
PPFIA1-223ENST00000532793 COA5Q86WW8 74 aa3.56□□□□□ -1.84
PPFIA1-223ENST00000532793 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
PPFIA1-223ENST00000532793 SPATA8Q6RVD6 105 aa3.53□□□□□ -1.84
PPFIA1-223ENST00000532793 COX7CP15954 63 aa3.52□□□□□ -1.85
PPFIA1-223ENST00000532793 A0A1B0GU33 70 aa3.51□□□□□ -1.85
PPFIA1-223ENST00000532793 H7BZZ5 65 aa3.51□□□□□ -1.85
PPFIA1-223ENST00000532793 MT1GP13640 62 aa3.51□□□□□ -1.85
PPFIA1-223ENST00000532793 DSTQ03001 7570 aaKnown RBP3.51□□□□□ -1.85
PPFIA1-223ENST00000532793 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
PPFIA1-223ENST00000532793 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
PPFIA1-223ENST00000532793 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
PPFIA1-223ENST00000532793 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
PPFIA1-223ENST00000532793 SMIM26A0A096LP01 95 aa3.45□□□□□ -1.86
PPFIA1-223ENST00000532793 KRTAP12-1P59990 96 aa3.45□□□□□ -1.86
PPFIA1-223ENST00000532793 MT4P47944 62 aa3.44□□□□□ -1.86
PPFIA1-223ENST00000532793 A0A1B0GU69 56 aa3.43□□□□□ -1.86
PPFIA1-223ENST00000532793 MT1MQ8N339 61 aa3.42□□□□□ -1.86
PPFIA1-223ENST00000532793 TNP1P09430 55 aa3.41□□□□□ -1.86
PPFIA1-223ENST00000532793 MT1LQ93083 61 aa3.4□□□□□ -1.87
PPFIA1-223ENST00000532793 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
PPFIA1-223ENST00000532793 CCDC179H3BU77 68 aa3.38□□□□□ -1.87
PPFIA1-223ENST00000532793 C10orf95Q9H7T3 257 aa3.38□□□□□ -1.87
PPFIA1-223ENST00000532793 A8MU10 97 aa3.36□□□□□ -1.87
PPFIA1-223ENST00000532793 ANAPC13Q9BS18 74 aa3.35□□□□□ -1.87
PPFIA1-223ENST00000532793 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
PPFIA1-223ENST00000532793 PRR15LQ9BU68 103 aa3.32□□□□□ -1.88
PPFIA1-223ENST00000532793 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
PPFIA1-223ENST00000532793 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
PPFIA1-223ENST00000532793 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
PPFIA1-223ENST00000532793 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
PPFIA1-223ENST00000532793 LINC01558Q9Y6Z2 57 aa3.24□□□□□ -1.89
PPFIA1-223ENST00000532793 ATP5EP56381 51 aaPredicted RBP3.21□□□□□ -1.9
PPFIA1-223ENST00000532793 KRTAP5-7Q6L8G8 165 aa3.17□□□□□ -1.9
PPFIA1-223ENST00000532793 UQCR11O14957 56 aa3.16□□□□□ -1.9
PPFIA1-223ENST00000532793 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
PPFIA1-223ENST00000532793 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
PPFIA1-223ENST00000532793 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.91
PPFIA1-223ENST00000532793 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
PPFIA1-223ENST00000532793 TMEM258P61165 79 aa3.15□□□□□ -1.91
PPFIA1-223ENST00000532793 K7ERS5 55 aa3.12□□□□□ -1.91
PPFIA1-223ENST00000532793 KRTAP25-1Q3LHN0 102 aa3.12□□□□□ -1.91
PPFIA1-223ENST00000532793 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
PPFIA1-223ENST00000532793 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
PPFIA1-223ENST00000532793 MIR22HGQ0VDD5 57 aa3.07□□□□□ -1.92
PPFIA1-223ENST00000532793 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
PPFIA1-223ENST00000532793 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.92
PPFIA1-223ENST00000532793 PSPHP1O15172 72 aa3.01□□□□□ -1.93
PPFIA1-223ENST00000532793 Q1T7F1 81 aa3□□□□□ -1.93
PPFIA1-223ENST00000532793 V9GYY9 64 aa2.95□□□□□ -1.94
PPFIA1-223ENST00000532793 MT1AP04731 61 aa2.91□□□□□ -1.94
PPFIA1-223ENST00000532793 CDC42SE1Q9NRR8 79 aa2.89□□□□□ -1.95
PPFIA1-223ENST00000532793 RPS28P62857 69 aaKnown RBP2.88□□□□□ -1.95
PPFIA1-223ENST00000532793 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
PPFIA1-223ENST00000532793 A6NED7 52 aa2.86□□□□□ -1.95
PPFIA1-223ENST00000532793 ROMO1P60602 79 aa2.8□□□□□ -1.96
PPFIA1-223ENST00000532793 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
PPFIA1-223ENST00000532793 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
PPFIA1-223ENST00000532793 PCP4P48539 62 aa2.78□□□□□ -1.96
PPFIA1-223ENST00000532793 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
PPFIA1-223ENST00000532793 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
PPFIA1-223ENST00000532793 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
PPFIA1-223ENST00000532793 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
PPFIA1-223ENST00000532793 SVIPQ8NHG7 77 aa2.55□□□□□ -2
PPFIA1-223ENST00000532793 BRK1Q8WUW1 75 aa2.43□□□□□ -2.02
PPFIA1-223ENST00000532793 NDUFAF8A1L188 74 aa2.4□□□□□ -2.03
PPFIA1-223ENST00000532793 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
PPFIA1-223ENST00000532793 PRAC1Q96KF2 57 aa2.29□□□□□ -2.04
PPFIA1-223ENST00000532793 PRO0628Q9UI54 55 aa2.29□□□□□ -2.04
PPFIA1-223ENST00000532793 PMAIP1Q13794 54 aa2.28□□□□□ -2.04
PPFIA1-223ENST00000532793 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
PPFIA1-223ENST00000532793 KTN1-AS1Q86SY8 53 aa2.12□□□□□ -2.07
PPFIA1-223ENST00000532793 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
PPFIA1-223ENST00000532793 LUZP6Q538Z0 58 aa1.87□□□□□ -2.11
PPFIA1-223ENST00000532793 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
PPFIA1-223ENST00000532793 PRM1P04553 51 aa1.45□□□□□ -2.18
PPFIA1-223ENST00000532793 INE1O15225 51 aa1.43□□□□□ -2.18
PPFIA1-223ENST00000532793 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 50.3 ms