RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 LCE1EQ5T753 118 aa4.96□□□□□ -1.62
CHD7-211ENST00000532149 A0A0A0MQY5 61 aa4.91□□□□□ -1.62
CHD7-211ENST00000532149 KRTAP5-9P26371 169 aa4.91□□□□□ -1.62
CHD7-211ENST00000532149 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.63
CHD7-211ENST00000532149 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
CHD7-211ENST00000532149 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
CHD7-211ENST00000532149 KRTAP5-1Q6L8H4 278 aa4.84□□□□□ -1.63
CHD7-211ENST00000532149 KRTAP5-4Q6L8H1 288 aa4.78□□□□□ -1.64
CHD7-211ENST00000532149 KRTAP19-6Q3LI70 58 aa4.75□□□□□ -1.65
CHD7-211ENST00000532149 LUZP6Q538Z0 58 aa4.75□□□□□ -1.65
CHD7-211ENST00000532149 KRTAP12-3P60328 96 aa4.74□□□□□ -1.65
CHD7-211ENST00000532149 USH2AO75445 5202 aa4.71□□□□□ -1.66
CHD7-211ENST00000532149 KRTAP4-4Q9BYR3 166 aa4.7□□□□□ -1.66
CHD7-211ENST00000532149 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
CHD7-211ENST00000532149 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
CHD7-211ENST00000532149 MT3P25713 68 aa4.58□□□□□ -1.68
CHD7-211ENST00000532149 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
CHD7-211ENST00000532149 NDUFAF8A1L188 74 aa4.57□□□□□ -1.68
CHD7-211ENST00000532149 FSIP2Q5CZC0 6907 aa4.57□□□□□ -1.68
CHD7-211ENST00000532149 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
CHD7-211ENST00000532149 KRTAP19-7Q3SYF9 63 aa4.45□□□□□ -1.7
CHD7-211ENST00000532149 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
CHD7-211ENST00000532149 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
CHD7-211ENST00000532149 MT1EP04732 61 aa4.39□□□□□ -1.71
CHD7-211ENST00000532149 LCE1FQ5T754 118 aa4.34□□□□□ -1.71
CHD7-211ENST00000532149 MT1LQ93083 61 aa4.33□□□□□ -1.72
CHD7-211ENST00000532149 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
CHD7-211ENST00000532149 KMT2DO14686 5537 aa4.29□□□□□ -1.72
CHD7-211ENST00000532149 MT1GP13640 62 aa4.28□□□□□ -1.72
CHD7-211ENST00000532149 KRTAP19-3Q7Z4W3 81 aa4.23□□□□□ -1.73
CHD7-211ENST00000532149 SPRR2FQ96RM1 72 aa4.15□□□□□ -1.75
CHD7-211ENST00000532149 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
CHD7-211ENST00000532149 MT1MQ8N339 61 aa4.12□□□□□ -1.75
CHD7-211ENST00000532149 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
CHD7-211ENST00000532149 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
CHD7-211ENST00000532149 INE1O15225 51 aa4.01□□□□□ -1.77
CHD7-211ENST00000532149 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
CHD7-211ENST00000532149 KRTAP6-3Q3LI67 103 aa4□□□□□ -1.77
CHD7-211ENST00000532149 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
CHD7-211ENST00000532149 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
CHD7-211ENST00000532149 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
CHD7-211ENST00000532149 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
CHD7-211ENST00000532149 MUC12Q9UKN1 5478 aa3.98□□□□□ -1.77
CHD7-211ENST00000532149 SPRR2EP22531 72 aa3.9□□□□□ -1.79
CHD7-211ENST00000532149 SPRR2BP35325 72 aa3.9□□□□□ -1.79
CHD7-211ENST00000532149 SPRR2AP35326 72 aa3.9□□□□□ -1.79
CHD7-211ENST00000532149 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
CHD7-211ENST00000532149 NEBP20929 6669 aa3.82□□□□□ -1.8
CHD7-211ENST00000532149 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
CHD7-211ENST00000532149 SPRR2DP22532 72 aa3.78□□□□□ -1.8
CHD7-211ENST00000532149 MT1AP04731 61 aa3.74□□□□□ -1.81
CHD7-211ENST00000532149 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
CHD7-211ENST00000532149 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
CHD7-211ENST00000532149 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
CHD7-211ENST00000532149 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
CHD7-211ENST00000532149 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
CHD7-211ENST00000532149 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
CHD7-211ENST00000532149 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
CHD7-211ENST00000532149 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
CHD7-211ENST00000532149 SYNE1Q8NF91 8797 aaKnown RBP3.36□□□□□ -1.87
CHD7-211ENST00000532149 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
CHD7-211ENST00000532149 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
CHD7-211ENST00000532149 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
CHD7-211ENST00000532149 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
CHD7-211ENST00000532149 MT4P47944 62 aa3.17□□□□□ -1.9
CHD7-211ENST00000532149 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
CHD7-211ENST00000532149 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
CHD7-211ENST00000532149 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
CHD7-211ENST00000532149 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
CHD7-211ENST00000532149 PRM1P04553 51 aa2.89□□□□□ -1.95
CHD7-211ENST00000532149 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
CHD7-211ENST00000532149 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
CHD7-211ENST00000532149 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
CHD7-211ENST00000532149 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
CHD7-211ENST00000532149 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
CHD7-211ENST00000532149 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
CHD7-211ENST00000532149 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
CHD7-211ENST00000532149 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 70.7 ms