RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 KRTAP12-1P59990 96 aa5.23□□□□□ -1.57
COPB1-208ENST00000532088 MT1XP80297 61 aa5.22□□□□□ -1.57
COPB1-208ENST00000532088 FCGBPQ9Y6R7 5405 aaPredicted RBP5.22□□□□□ -1.57
COPB1-208ENST00000532088 SPINT4Q6UDR6 99 aa5.2□□□□□ -1.58
COPB1-208ENST00000532088 KRTAP12-2P59991 146 aa5.18□□□□□ -1.58
COPB1-208ENST00000532088 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
COPB1-208ENST00000532088 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
COPB1-208ENST00000532088 K7ERS5 55 aa5.09□□□□□ -1.59
COPB1-208ENST00000532088 LCE3CQ5T5A8 94 aa5.02□□□□□ -1.61
COPB1-208ENST00000532088 SYNE2Q8WXH0 6885 aaKnown RBP4.97□□□□□ -1.61
COPB1-208ENST00000532088 C10orf95Q9H7T3 257 aa4.96□□□□□ -1.62
COPB1-208ENST00000532088 TNP1P09430 55 aa4.91□□□□□ -1.62
COPB1-208ENST00000532088 KRTAP6-3Q3LI67 103 aa4.89□□□□□ -1.63
COPB1-208ENST00000532088 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
COPB1-208ENST00000532088 KMT2DO14686 5537 aa4.84□□□□□ -1.63
COPB1-208ENST00000532088 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
COPB1-208ENST00000532088 KRTAP8-1Q8IUC2 63 aa4.83□□□□□ -1.64
COPB1-208ENST00000532088 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
COPB1-208ENST00000532088 ROMO1P60602 79 aa4.81□□□□□ -1.64
COPB1-208ENST00000532088 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
COPB1-208ENST00000532088 SPRR2FQ96RM1 72 aa4.71□□□□□ -1.66
COPB1-208ENST00000532088 KRTAP5-1Q6L8H4 278 aa4.68□□□□□ -1.66
COPB1-208ENST00000532088 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
COPB1-208ENST00000532088 MUC12Q9UKN1 5478 aa4.66□□□□□ -1.66
COPB1-208ENST00000532088 NEBP20929 6669 aa4.65□□□□□ -1.67
COPB1-208ENST00000532088 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
COPB1-208ENST00000532088 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
COPB1-208ENST00000532088 MT1EP04732 61 aa4.61□□□□□ -1.67
COPB1-208ENST00000532088 LCE3EQ5T5B0 92 aa4.58□□□□□ -1.68
COPB1-208ENST00000532088 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
COPB1-208ENST00000532088 SPRR2EP22531 72 aa4.56□□□□□ -1.68
COPB1-208ENST00000532088 SPRR2BP35325 72 aa4.56□□□□□ -1.68
COPB1-208ENST00000532088 SPRR2AP35326 72 aa4.56□□□□□ -1.68
COPB1-208ENST00000532088 KRTAP12-3P60328 96 aa4.56□□□□□ -1.68
COPB1-208ENST00000532088 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
COPB1-208ENST00000532088 KRTAP5-4Q6L8H1 288 aa4.5□□□□□ -1.69
COPB1-208ENST00000532088 KRTAP4-4Q9BYR3 166 aa4.48□□□□□ -1.69
COPB1-208ENST00000532088 MT1GP13640 62 aa4.46□□□□□ -1.7
COPB1-208ENST00000532088 MT1LQ93083 61 aa4.46□□□□□ -1.7
COPB1-208ENST00000532088 SPRR2DP22532 72 aa4.4□□□□□ -1.71
COPB1-208ENST00000532088 MT1MQ8N339 61 aa4.35□□□□□ -1.71
COPB1-208ENST00000532088 KRTAP2-3P0C7H8 128 aa4.33□□□□□ -1.72
COPB1-208ENST00000532088 KRTAP2-4Q9BYR9 128 aa4.33□□□□□ -1.72
COPB1-208ENST00000532088 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
COPB1-208ENST00000532088 KRTAP20-1Q3LI63 56 aa4.31□□□□□ -1.72
COPB1-208ENST00000532088 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
COPB1-208ENST00000532088 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
COPB1-208ENST00000532088 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
COPB1-208ENST00000532088 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
COPB1-208ENST00000532088 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
COPB1-208ENST00000532088 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
COPB1-208ENST00000532088 INE1O15225 51 aa3.82□□□□□ -1.8
COPB1-208ENST00000532088 MT1AP04731 61 aa3.82□□□□□ -1.8
COPB1-208ENST00000532088 MT4P47944 62 aa3.79□□□□□ -1.8
COPB1-208ENST00000532088 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
COPB1-208ENST00000532088 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
COPB1-208ENST00000532088 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
COPB1-208ENST00000532088 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
COPB1-208ENST00000532088 HMCN1Q96RW7 5635 aa3.73□□□□□ -1.81
COPB1-208ENST00000532088 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
COPB1-208ENST00000532088 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
COPB1-208ENST00000532088 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
COPB1-208ENST00000532088 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
COPB1-208ENST00000532088 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
COPB1-208ENST00000532088 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
COPB1-208ENST00000532088 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
COPB1-208ENST00000532088 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
COPB1-208ENST00000532088 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
COPB1-208ENST00000532088 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
COPB1-208ENST00000532088 MUC5ACP98088 5654 aa3□□□□□ -1.93
COPB1-208ENST00000532088 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
COPB1-208ENST00000532088 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
COPB1-208ENST00000532088 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
COPB1-208ENST00000532088 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
COPB1-208ENST00000532088 PRM1P04553 51 aa2.45□□□□□ -2.02
COPB1-208ENST00000532088 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
COPB1-208ENST00000532088 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
COPB1-208ENST00000532088 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 101.3 ms