RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 LCE3BQ5TA77 95 aa5.46□□□□□ -1.54
NXF1-210ENST00000531579 LCE3AQ5TA76 89 aa5.43□□□□□ -1.54
NXF1-210ENST00000531579 MT1GP13640 62 aa5.41□□□□□ -1.54
NXF1-210ENST00000531579 A6NED7 52 aa5.38□□□□□ -1.55
NXF1-210ENST00000531579 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
NXF1-210ENST00000531579 KRTAP25-1Q3LHN0 102 aa5.37□□□□□ -1.55
NXF1-210ENST00000531579 MT1LQ93083 61 aa5.31□□□□□ -1.56
NXF1-210ENST00000531579 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
NXF1-210ENST00000531579 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
NXF1-210ENST00000531579 MT1MQ8N339 61 aa5.25□□□□□ -1.57
NXF1-210ENST00000531579 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
NXF1-210ENST00000531579 CDC42SE1Q9NRR8 79 aa5.19□□□□□ -1.58
NXF1-210ENST00000531579 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
NXF1-210ENST00000531579 ROMO1P60602 79 aa5.11□□□□□ -1.59
NXF1-210ENST00000531579 KRTAP4-3Q9BYR4 195 aa5.08□□□□□ -1.6
NXF1-210ENST00000531579 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
NXF1-210ENST00000531579 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
NXF1-210ENST00000531579 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
NXF1-210ENST00000531579 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
NXF1-210ENST00000531579 KRTAP5-4Q6L8H1 288 aa4.94□□□□□ -1.62
NXF1-210ENST00000531579 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
NXF1-210ENST00000531579 MT4P47944 62 aa4.88□□□□□ -1.63
NXF1-210ENST00000531579 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
NXF1-210ENST00000531579 HMCN1Q96RW7 5635 aa4.81□□□□□ -1.64
NXF1-210ENST00000531579 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
NXF1-210ENST00000531579 AHNAK2Q8IVF2 5795 aa4.78□□□□□ -1.64
NXF1-210ENST00000531579 BRK1Q8WUW1 75 aa4.77□□□□□ -1.65
NXF1-210ENST00000531579 KRTAP4-6Q9BYQ5 205 aa4.77□□□□□ -1.65
NXF1-210ENST00000531579 LOC100996750A0A140TA64 210 aa4.75□□□□□ -1.65
NXF1-210ENST00000531579 KRTAP5-10Q6L8G5 202 aa4.71□□□□□ -1.66
NXF1-210ENST00000531579 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
NXF1-210ENST00000531579 SPRR5A0A1B0GTR4 108 aa4.68□□□□□ -1.66
NXF1-210ENST00000531579 KRTAP20-2Q3LI61 65 aa4.63□□□□□ -1.67
NXF1-210ENST00000531579 KRTAP5-7Q6L8G8 165 aa4.58□□□□□ -1.68
NXF1-210ENST00000531579 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
NXF1-210ENST00000531579 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
NXF1-210ENST00000531579 MT1AP04731 61 aa4.54□□□□□ -1.68
NXF1-210ENST00000531579 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
NXF1-210ENST00000531579 PMAIP1Q13794 54 aa4.53□□□□□ -1.68
NXF1-210ENST00000531579 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
NXF1-210ENST00000531579 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
NXF1-210ENST00000531579 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
NXF1-210ENST00000531579 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
NXF1-210ENST00000531579 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
NXF1-210ENST00000531579 KRTAP6-2Q3LI66 62 aa4.25□□□□□ -1.73
NXF1-210ENST00000531579 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
NXF1-210ENST00000531579 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
NXF1-210ENST00000531579 MT3P25713 68 aa4.18□□□□□ -1.74
NXF1-210ENST00000531579 AHNAKQ09666 5890 aaKnown RBP4.1□□□□□ -1.75
NXF1-210ENST00000531579 KTN1-AS1Q86SY8 53 aa4.07□□□□□ -1.76
NXF1-210ENST00000531579 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
NXF1-210ENST00000531579 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
NXF1-210ENST00000531579 KRTAP5-8O75690 187 aa4.04□□□□□ -1.76
NXF1-210ENST00000531579 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
NXF1-210ENST00000531579 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
NXF1-210ENST00000531579 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
NXF1-210ENST00000531579 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
NXF1-210ENST00000531579 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
NXF1-210ENST00000531579 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
NXF1-210ENST00000531579 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
NXF1-210ENST00000531579 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
NXF1-210ENST00000531579 H3BS24 57 aa3.52□□□□□ -1.85
NXF1-210ENST00000531579 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
NXF1-210ENST00000531579 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
NXF1-210ENST00000531579 A0A0A0MQY5 61 aa3.34□□□□□ -1.87
NXF1-210ENST00000531579 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
NXF1-210ENST00000531579 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
NXF1-210ENST00000531579 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
NXF1-210ENST00000531579 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
NXF1-210ENST00000531579 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
NXF1-210ENST00000531579 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
NXF1-210ENST00000531579 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
NXF1-210ENST00000531579 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
NXF1-210ENST00000531579 PRM1P04553 51 aa2.59□□□□□ -1.99
NXF1-210ENST00000531579 INE1O15225 51 aa2.51□□□□□ -2.01
NXF1-210ENST00000531579 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
NXF1-210ENST00000531579 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
NXF1-210ENST00000531579 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms