RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
AMBRA1-210ENST00000531542 A8MU10 97 aa4.6□□□□□ -1.67
AMBRA1-210ENST00000531542 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
AMBRA1-210ENST00000531542 CCDC179H3BU77 68 aa4.58□□□□□ -1.68
AMBRA1-210ENST00000531542 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
AMBRA1-210ENST00000531542 KRTAP5-10Q6L8G5 202 aa4.54□□□□□ -1.68
AMBRA1-210ENST00000531542 KRTAP4-6Q9BYQ5 205 aa4.54□□□□□ -1.68
AMBRA1-210ENST00000531542 TMEM258P61165 79 aa4.49□□□□□ -1.69
AMBRA1-210ENST00000531542 KRTAP12-3P60328 96 aa4.48□□□□□ -1.69
AMBRA1-210ENST00000531542 PRR15LQ9BU68 103 aa4.47□□□□□ -1.69
AMBRA1-210ENST00000531542 RPS28P62857 69 aaKnown RBP4.46□□□□□ -1.7
AMBRA1-210ENST00000531542 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
AMBRA1-210ENST00000531542 ATP5EP56381 51 aaPredicted RBP4.4□□□□□ -1.71
AMBRA1-210ENST00000531542 KRTAP5-7Q6L8G8 165 aa4.4□□□□□ -1.71
AMBRA1-210ENST00000531542 KRTAP5-5Q701N2 237 aaPredicted RBP4.4□□□□□ -1.71
AMBRA1-210ENST00000531542 LINC01558Q9Y6Z2 57 aa4.4□□□□□ -1.71
AMBRA1-210ENST00000531542 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
AMBRA1-210ENST00000531542 KRTAP20-2Q3LI61 65 aa4.38□□□□□ -1.71
AMBRA1-210ENST00000531542 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
AMBRA1-210ENST00000531542 KRTAP19-4Q3LI73 84 aa4.35□□□□□ -1.71
AMBRA1-210ENST00000531542 UQCR11O14957 56 aa4.33□□□□□ -1.72
AMBRA1-210ENST00000531542 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
AMBRA1-210ENST00000531542 KRTAP12-4P60329 112 aa4.31□□□□□ -1.72
AMBRA1-210ENST00000531542 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
AMBRA1-210ENST00000531542 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
AMBRA1-210ENST00000531542 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
AMBRA1-210ENST00000531542 MIR22HGQ0VDD5 57 aa4.19□□□□□ -1.74
AMBRA1-210ENST00000531542 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
AMBRA1-210ENST00000531542 K7ERS5 55 aa4.16□□□□□ -1.74
AMBRA1-210ENST00000531542 KRTAP15-1Q3LI76 137 aa4.14□□□□□ -1.75
AMBRA1-210ENST00000531542 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
AMBRA1-210ENST00000531542 Q1T7F1 81 aa4.1□□□□□ -1.75
AMBRA1-210ENST00000531542 V9GYY9 64 aa4.1□□□□□ -1.75
AMBRA1-210ENST00000531542 KRTAP5-2Q701N4 177 aa4.06□□□□□ -1.76
AMBRA1-210ENST00000531542 BRK1Q8WUW1 75 aa4.05□□□□□ -1.76
AMBRA1-210ENST00000531542 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
AMBRA1-210ENST00000531542 MT1AP04731 61 aa4.04□□□□□ -1.76
AMBRA1-210ENST00000531542 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
AMBRA1-210ENST00000531542 PSPHP1O15172 72 aa3.97□□□□□ -1.77
AMBRA1-210ENST00000531542 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
AMBRA1-210ENST00000531542 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
AMBRA1-210ENST00000531542 CDC42SE1Q9NRR8 79 aa3.91□□□□□ -1.78
AMBRA1-210ENST00000531542 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
AMBRA1-210ENST00000531542 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
AMBRA1-210ENST00000531542 A6NED7 52 aa3.85□□□□□ -1.79
AMBRA1-210ENST00000531542 KRTAP6-2Q3LI66 62 aa3.85□□□□□ -1.79
AMBRA1-210ENST00000531542 ROMO1P60602 79 aa3.84□□□□□ -1.79
AMBRA1-210ENST00000531542 KTN1-AS1Q86SY8 53 aa3.83□□□□□ -1.8
AMBRA1-210ENST00000531542 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
AMBRA1-210ENST00000531542 AHNAKQ09666 5890 aaKnown RBP3.81□□□□□ -1.8
AMBRA1-210ENST00000531542 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
AMBRA1-210ENST00000531542 MUC5BQ9HC84 5762 aaPredicted RBP3.81□□□□□ -1.8
AMBRA1-210ENST00000531542 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
AMBRA1-210ENST00000531542 MT3P25713 68 aa3.71□□□□□ -1.82
AMBRA1-210ENST00000531542 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
AMBRA1-210ENST00000531542 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
AMBRA1-210ENST00000531542 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
AMBRA1-210ENST00000531542 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
AMBRA1-210ENST00000531542 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
AMBRA1-210ENST00000531542 H3BS24 57 aa3.24□□□□□ -1.89
AMBRA1-210ENST00000531542 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
AMBRA1-210ENST00000531542 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
AMBRA1-210ENST00000531542 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
AMBRA1-210ENST00000531542 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
AMBRA1-210ENST00000531542 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
AMBRA1-210ENST00000531542 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
AMBRA1-210ENST00000531542 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
AMBRA1-210ENST00000531542 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
AMBRA1-210ENST00000531542 A0A0A0MQY5 61 aa2.78□□□□□ -1.96
AMBRA1-210ENST00000531542 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
AMBRA1-210ENST00000531542 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
AMBRA1-210ENST00000531542 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
AMBRA1-210ENST00000531542 INE1O15225 51 aa2.56□□□□□ -2
AMBRA1-210ENST00000531542 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
AMBRA1-210ENST00000531542 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
AMBRA1-210ENST00000531542 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
AMBRA1-210ENST00000531542 PRM1P04553 51 aa1.92□□□□□ -2.1
AMBRA1-210ENST00000531542 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 89.5 ms