RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 MT1MQ8N339 61 aa7.92□□□□□ -1.14
TRAPPC4-210ENST00000531290 PSPHP1O15172 72 aa7.91□□□□□ -1.14
TRAPPC4-210ENST00000531290 Q1T7F1 81 aa7.91□□□□□ -1.14
TRAPPC4-210ENST00000531290 LCE1DQ5T752 114 aa7.91□□□□□ -1.14
TRAPPC4-210ENST00000531290 K7ERS5 55 aa7.9□□□□□ -1.14
TRAPPC4-210ENST00000531290 MT1LQ93083 61 aa7.9□□□□□ -1.14
TRAPPC4-210ENST00000531290 LCE4AQ5TA78 99 aa7.87□□□□□ -1.15
TRAPPC4-210ENST00000531290 LCE3AQ5TA76 89 aa7.84□□□□□ -1.15
TRAPPC4-210ENST00000531290 MT4P47944 62 aa7.83□□□□□ -1.16
TRAPPC4-210ENST00000531290 HMCN1Q96RW7 5635 aa7.82□□□□□ -1.16
TRAPPC4-210ENST00000531290 KRTAP4-3Q9BYR4 195 aa7.74□□□□□ -1.17
TRAPPC4-210ENST00000531290 PCP4P48539 62 aa7.73□□□□□ -1.17
TRAPPC4-210ENST00000531290 A6NED7 52 aa7.7□□□□□ -1.18
TRAPPC4-210ENST00000531290 RPS28P62857 69 aaKnown RBP7.67□□□□□ -1.18
TRAPPC4-210ENST00000531290 KRTAP25-1Q3LHN0 102 aa7.67□□□□□ -1.18
TRAPPC4-210ENST00000531290 KRTAP5-4Q6L8H1 288 aa7.65□□□□□ -1.18
TRAPPC4-210ENST00000531290 AHNAK2Q8IVF2 5795 aa7.6□□□□□ -1.19
TRAPPC4-210ENST00000531290 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
TRAPPC4-210ENST00000531290 KRTAP4-6Q9BYQ5 205 aa7.56□□□□□ -1.2
TRAPPC4-210ENST00000531290 KRTAP4-7Q9BYR0 210 aa7.5□□□□□ -1.21
TRAPPC4-210ENST00000531290 CDC42SE1Q9NRR8 79 aa7.44□□□□□ -1.22
TRAPPC4-210ENST00000531290 KRTAP5-10Q6L8G5 202 aa7.43□□□□□ -1.22
TRAPPC4-210ENST00000531290 KRTAP23-1A1A580 65 aa7.37□□□□□ -1.23
TRAPPC4-210ENST00000531290 ROMO1P60602 79 aa7.3□□□□□ -1.24
TRAPPC4-210ENST00000531290 KRTAP5-5Q701N2 237 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC4-210ENST00000531290 KRTAP20-2Q3LI61 65 aa7.25□□□□□ -1.25
TRAPPC4-210ENST00000531290 KRTAP5-3Q6L8H2 238 aa7.23□□□□□ -1.25
TRAPPC4-210ENST00000531290 KRTAP19-4Q3LI73 84 aa7.22□□□□□ -1.25
TRAPPC4-210ENST00000531290 SPRR5A0A1B0GTR4 108 aa7.21□□□□□ -1.26
TRAPPC4-210ENST00000531290 KRTAP12-4P60329 112 aa7.2□□□□□ -1.26
TRAPPC4-210ENST00000531290 KRTAP5-7Q6L8G8 165 aa7.18□□□□□ -1.26
TRAPPC4-210ENST00000531290 KRTAP15-1Q3LI76 137 aa7.15□□□□□ -1.26
TRAPPC4-210ENST00000531290 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
TRAPPC4-210ENST00000531290 SYNE1Q8NF91 8797 aaKnown RBP7.07□□□□□ -1.28
TRAPPC4-210ENST00000531290 LCE3CQ5T5A8 94 aa6.99□□□□□ -1.29
TRAPPC4-210ENST00000531290 BRK1Q8WUW1 75 aa6.8□□□□□ -1.32
TRAPPC4-210ENST00000531290 MT1AP04731 61 aa6.72□□□□□ -1.33
TRAPPC4-210ENST00000531290 KRTAP6-1Q3LI64 71 aa6.69□□□□□ -1.34
TRAPPC4-210ENST00000531290 KRTAP4-11Q9BYQ6 195 aa6.68□□□□□ -1.34
TRAPPC4-210ENST00000531290 KRTAP5-2Q701N4 177 aa6.66□□□□□ -1.34
TRAPPC4-210ENST00000531290 KRTAP9-4Q9BYQ2 154 aa6.54□□□□□ -1.36
TRAPPC4-210ENST00000531290 KRTAP9-6A8MVA2 160 aa6.49□□□□□ -1.37
TRAPPC4-210ENST00000531290 KRTAP6-2Q3LI66 62 aa6.45□□□□□ -1.38
TRAPPC4-210ENST00000531290 KRTAP5-8O75690 187 aa6.44□□□□□ -1.38
TRAPPC4-210ENST00000531290 PMAIP1Q13794 54 aa6.43□□□□□ -1.38
TRAPPC4-210ENST00000531290 OBSCNQ5VST9 7968 aa6.36□□□□□ -1.39
TRAPPC4-210ENST00000531290 AHNAKQ09666 5890 aaKnown RBP6.35□□□□□ -1.39
TRAPPC4-210ENST00000531290 MUC5BQ9HC84 5762 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC4-210ENST00000531290 MUC5ACP98088 5654 aa6.29□□□□□ -1.4
TRAPPC4-210ENST00000531290 MT3P25713 68 aa6.2□□□□□ -1.42
TRAPPC4-210ENST00000531290 KRTAP9-9Q9BYP9 154 aa6.2□□□□□ -1.42
TRAPPC4-210ENST00000531290 PRAC1Q96KF2 57 aa6.06□□□□□ -1.44
TRAPPC4-210ENST00000531290 PRO0628Q9UI54 55 aa6.04□□□□□ -1.44
TRAPPC4-210ENST00000531290 KRTAP5-1Q6L8H4 278 aa6.01□□□□□ -1.45
TRAPPC4-210ENST00000531290 KTN1-AS1Q86SY8 53 aa5.74□□□□□ -1.49
TRAPPC4-210ENST00000531290 LCE1EQ5T753 118 aa5.72□□□□□ -1.49
TRAPPC4-210ENST00000531290 SVIPQ8NHG7 77 aa5.57□□□□□ -1.52
TRAPPC4-210ENST00000531290 LCE1BQ5T7P3 118 aa5.43□□□□□ -1.54
TRAPPC4-210ENST00000531290 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
TRAPPC4-210ENST00000531290 LCE1CQ5T751 118 aa5.3□□□□□ -1.56
TRAPPC4-210ENST00000531290 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
TRAPPC4-210ENST00000531290 KRTAP4-12Q9BQ66 201 aa5.22□□□□□ -1.57
TRAPPC4-210ENST00000531290 LCE3DQ9BYE3 92 aa5.11□□□□□ -1.59
TRAPPC4-210ENST00000531290 LCE3EQ5T5B0 92 aa4.83□□□□□ -1.64
TRAPPC4-210ENST00000531290 KRTAP5-11Q6L8G4 156 aa4.8□□□□□ -1.64
TRAPPC4-210ENST00000531290 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC4-210ENST00000531290 LCE1FQ5T754 118 aa4.75□□□□□ -1.65
TRAPPC4-210ENST00000531290 KRTAP21-2Q3LI59 83 aa4.4□□□□□ -1.71
TRAPPC4-210ENST00000531290 H3BS24 57 aa4.38□□□□□ -1.71
TRAPPC4-210ENST00000531290 PHGR1C9JFL3 82 aa4.37□□□□□ -1.71
TRAPPC4-210ENST00000531290 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
TRAPPC4-210ENST00000531290 KRTAP4-4Q9BYR3 166 aa4.09□□□□□ -1.75
TRAPPC4-210ENST00000531290 MUC19Q7Z5P9 8384 aa3.95□□□□□ -1.78
TRAPPC4-210ENST00000531290 PRM1P04553 51 aa3.71□□□□□ -1.82
TRAPPC4-210ENST00000531290 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
TRAPPC4-210ENST00000531290 INE1O15225 51 aa3.49□□□□□ -1.85
TRAPPC4-210ENST00000531290 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
TRAPPC4-210ENST00000531290 MUC16Q8WXI7 14507 aa2.75□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms