RNA–Protein interactions for RNA: ENST00000531249.2

FDFT1-219, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-219ENST00000531249 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
FDFT1-219ENST00000531249 KRTAP19-7Q3SYF9 63 aa5.09□□□□□ -1.59
FDFT1-219ENST00000531249 LCE1AQ5T7P2 110 aa5.09□□□□□ -1.59
FDFT1-219ENST00000531249 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
FDFT1-219ENST00000531249 MT1EP04732 61 aa5.03□□□□□ -1.6
FDFT1-219ENST00000531249 SPRR2DP22532 72 aa4.96□□□□□ -1.62
FDFT1-219ENST00000531249 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
FDFT1-219ENST00000531249 LUZP6Q538Z0 58 aa4.93□□□□□ -1.62
FDFT1-219ENST00000531249 KRTAP19-3Q7Z4W3 81 aa4.92□□□□□ -1.62
FDFT1-219ENST00000531249 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
FDFT1-219ENST00000531249 KRTAP12-3P60328 96 aa4.9□□□□□ -1.63
FDFT1-219ENST00000531249 KRTAP2-3P0C7H8 128 aa4.88□□□□□ -1.63
FDFT1-219ENST00000531249 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
FDFT1-219ENST00000531249 KRTAP2-4Q9BYR9 128 aa4.88□□□□□ -1.63
FDFT1-219ENST00000531249 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
FDFT1-219ENST00000531249 MT1LQ93083 61 aa4.86□□□□□ -1.63
FDFT1-219ENST00000531249 MT1GP13640 62 aa4.83□□□□□ -1.64
FDFT1-219ENST00000531249 H3BS24 57 aa4.81□□□□□ -1.64
FDFT1-219ENST00000531249 LCE3BQ5TA77 95 aa4.79□□□□□ -1.64
FDFT1-219ENST00000531249 MT1MQ8N339 61 aa4.78□□□□□ -1.64
FDFT1-219ENST00000531249 KRTAP2-2Q9BYT5 123 aa4.74□□□□□ -1.65
FDFT1-219ENST00000531249 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
FDFT1-219ENST00000531249 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
FDFT1-219ENST00000531249 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
FDFT1-219ENST00000531249 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
FDFT1-219ENST00000531249 DSTQ03001 7570 aaKnown RBP4.66□□□□□ -1.66
FDFT1-219ENST00000531249 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
FDFT1-219ENST00000531249 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
FDFT1-219ENST00000531249 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
FDFT1-219ENST00000531249 KRTAP4-9Q9BYQ8 210 aa4.41□□□□□ -1.7
FDFT1-219ENST00000531249 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
FDFT1-219ENST00000531249 MT4P47944 62 aa4.34□□□□□ -1.71
FDFT1-219ENST00000531249 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.71
FDFT1-219ENST00000531249 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
FDFT1-219ENST00000531249 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
FDFT1-219ENST00000531249 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
FDFT1-219ENST00000531249 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
FDFT1-219ENST00000531249 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
FDFT1-219ENST00000531249 INE1O15225 51 aa4.19□□□□□ -1.74
FDFT1-219ENST00000531249 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
FDFT1-219ENST00000531249 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
FDFT1-219ENST00000531249 MT1AP04731 61 aa4.14□□□□□ -1.75
FDFT1-219ENST00000531249 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
FDFT1-219ENST00000531249 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
FDFT1-219ENST00000531249 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
FDFT1-219ENST00000531249 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
FDFT1-219ENST00000531249 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
FDFT1-219ENST00000531249 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
FDFT1-219ENST00000531249 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
FDFT1-219ENST00000531249 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
FDFT1-219ENST00000531249 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
FDFT1-219ENST00000531249 MT3P25713 68 aa3.77□□□□□ -1.81
FDFT1-219ENST00000531249 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
FDFT1-219ENST00000531249 KRTAP5-7Q6L8G8 165 aa3.62□□□□□ -1.83
FDFT1-219ENST00000531249 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
FDFT1-219ENST00000531249 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
FDFT1-219ENST00000531249 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
FDFT1-219ENST00000531249 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
FDFT1-219ENST00000531249 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
FDFT1-219ENST00000531249 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
FDFT1-219ENST00000531249 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
FDFT1-219ENST00000531249 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
FDFT1-219ENST00000531249 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
FDFT1-219ENST00000531249 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
FDFT1-219ENST00000531249 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
FDFT1-219ENST00000531249 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
FDFT1-219ENST00000531249 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
FDFT1-219ENST00000531249 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
FDFT1-219ENST00000531249 PRM1P04553 51 aa3.07□□□□□ -1.92
FDFT1-219ENST00000531249 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
FDFT1-219ENST00000531249 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
FDFT1-219ENST00000531249 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
FDFT1-219ENST00000531249 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
FDFT1-219ENST00000531249 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
FDFT1-219ENST00000531249 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
FDFT1-219ENST00000531249 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
FDFT1-219ENST00000531249 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
FDFT1-219ENST00000531249 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms