RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 C10orf95Q9H7T3 257 aa4.08□□□□□ -1.76
CTNND1-228ENST00000531007 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
CTNND1-228ENST00000531007 MT1XP80297 61 aa4.07□□□□□ -1.76
CTNND1-228ENST00000531007 KRTAP25-1Q3LHN0 102 aa4.07□□□□□ -1.76
CTNND1-228ENST00000531007 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
CTNND1-228ENST00000531007 KTN1-AS1Q86SY8 53 aa4.07□□□□□ -1.76
CTNND1-228ENST00000531007 TNP1P09430 55 aa4.06□□□□□ -1.76
CTNND1-228ENST00000531007 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
CTNND1-228ENST00000531007 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
CTNND1-228ENST00000531007 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
CTNND1-228ENST00000531007 PP632Q6XCG6 107 aa3.97□□□□□ -1.77
CTNND1-228ENST00000531007 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
CTNND1-228ENST00000531007 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
CTNND1-228ENST00000531007 MACF1Q9UPN3 7388 aaKnown RBP3.87□□□□□ -1.79
CTNND1-228ENST00000531007 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
CTNND1-228ENST00000531007 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
CTNND1-228ENST00000531007 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
CTNND1-228ENST00000531007 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
CTNND1-228ENST00000531007 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
CTNND1-228ENST00000531007 LCE3AQ5TA76 89 aa3.8□□□□□ -1.8
CTNND1-228ENST00000531007 KRTAP8-1Q8IUC2 63 aa3.8□□□□□ -1.8
CTNND1-228ENST00000531007 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
CTNND1-228ENST00000531007 KRTAP6-3Q3LI67 103 aa3.79□□□□□ -1.8
CTNND1-228ENST00000531007 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
CTNND1-228ENST00000531007 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
CTNND1-228ENST00000531007 KRTAP19-7Q3SYF9 63 aa3.63□□□□□ -1.83
CTNND1-228ENST00000531007 KMT2DO14686 5537 aa3.62□□□□□ -1.83
CTNND1-228ENST00000531007 NEBP20929 6669 aa3.6□□□□□ -1.83
CTNND1-228ENST00000531007 MT1EP04732 61 aa3.59□□□□□ -1.83
CTNND1-228ENST00000531007 SPRR2FQ96RM1 72 aa3.57□□□□□ -1.84
CTNND1-228ENST00000531007 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
CTNND1-228ENST00000531007 SPRR2EP22531 72 aa3.51□□□□□ -1.85
CTNND1-228ENST00000531007 SPRR2BP35325 72 aa3.51□□□□□ -1.85
CTNND1-228ENST00000531007 SPRR2AP35326 72 aa3.51□□□□□ -1.85
CTNND1-228ENST00000531007 MDN1Q9NU22 5596 aa3.5□□□□□ -1.85
CTNND1-228ENST00000531007 MT1LQ93083 61 aa3.5□□□□□ -1.85
CTNND1-228ENST00000531007 MT1GP13640 62 aa3.49□□□□□ -1.85
CTNND1-228ENST00000531007 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
CTNND1-228ENST00000531007 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
CTNND1-228ENST00000531007 KRTAP19-3Q7Z4W3 81 aa3.48□□□□□ -1.85
CTNND1-228ENST00000531007 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
CTNND1-228ENST00000531007 KRTAP2-3P0C7H8 128 aa3.42□□□□□ -1.86
CTNND1-228ENST00000531007 KRTAP2-4Q9BYR9 128 aa3.42□□□□□ -1.86
CTNND1-228ENST00000531007 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
CTNND1-228ENST00000531007 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
CTNND1-228ENST00000531007 SPRR2DP22532 72 aa3.39□□□□□ -1.87
CTNND1-228ENST00000531007 MT1MQ8N339 61 aa3.38□□□□□ -1.87
CTNND1-228ENST00000531007 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
CTNND1-228ENST00000531007 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
CTNND1-228ENST00000531007 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
CTNND1-228ENST00000531007 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
CTNND1-228ENST00000531007 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
CTNND1-228ENST00000531007 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
CTNND1-228ENST00000531007 MT1AP04731 61 aa3.01□□□□□ -1.93
CTNND1-228ENST00000531007 MT4P47944 62 aa2.96□□□□□ -1.94
CTNND1-228ENST00000531007 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
CTNND1-228ENST00000531007 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
CTNND1-228ENST00000531007 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
CTNND1-228ENST00000531007 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
CTNND1-228ENST00000531007 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.95
CTNND1-228ENST00000531007 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
CTNND1-228ENST00000531007 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
CTNND1-228ENST00000531007 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
CTNND1-228ENST00000531007 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
CTNND1-228ENST00000531007 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
CTNND1-228ENST00000531007 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
CTNND1-228ENST00000531007 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
CTNND1-228ENST00000531007 INE1O15225 51 aa2.67□□□□□ -1.98
CTNND1-228ENST00000531007 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
CTNND1-228ENST00000531007 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
CTNND1-228ENST00000531007 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
CTNND1-228ENST00000531007 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
CTNND1-228ENST00000531007 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
CTNND1-228ENST00000531007 PRM1P04553 51 aa2.12□□□□□ -2.07
CTNND1-228ENST00000531007 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
CTNND1-228ENST00000531007 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
CTNND1-228ENST00000531007 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
CTNND1-228ENST00000531007 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 122.4 ms