RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 MACF1Q9UPN3 7388 aaKnown RBP6.69□□□□□ -1.34
LTBP3-217ENST00000530785 KRTAP9-6A0A140TA67 174 aa6.63□□□□□ -1.35
LTBP3-217ENST00000530785 MT1EP04732 61 aa6.61□□□□□ -1.35
LTBP3-217ENST00000530785 SYNE2Q8WXH0 6885 aaKnown RBP6.57□□□□□ -1.36
LTBP3-217ENST00000530785 MT1LQ93083 61 aa6.57□□□□□ -1.36
LTBP3-217ENST00000530785 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
LTBP3-217ENST00000530785 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
LTBP3-217ENST00000530785 MUC12Q9UKN1 5478 aa6.39□□□□□ -1.39
LTBP3-217ENST00000530785 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.38□□□□□ -1.39
LTBP3-217ENST00000530785 SPRR2FQ96RM1 72 aa6.27□□□□□ -1.4
LTBP3-217ENST00000530785 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
LTBP3-217ENST00000530785 KRTAP4-3Q9BYR4 195 aa6.23□□□□□ -1.41
LTBP3-217ENST00000530785 MDN1Q9NU22 5596 aa6.22□□□□□ -1.41
LTBP3-217ENST00000530785 MT1MQ8N339 61 aa6.19□□□□□ -1.42
LTBP3-217ENST00000530785 KRTAP5-9P26371 169 aa6.19□□□□□ -1.42
LTBP3-217ENST00000530785 MT1GP13640 62 aa6.18□□□□□ -1.42
LTBP3-217ENST00000530785 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
LTBP3-217ENST00000530785 KRTAP12-4P60329 112 aa6.13□□□□□ -1.43
LTBP3-217ENST00000530785 KRTAP6-3Q3LI67 103 aa6.13□□□□□ -1.43
LTBP3-217ENST00000530785 KRTAP9-7A8MTY7 169 aa6.07□□□□□ -1.44
LTBP3-217ENST00000530785 LCE5AQ5TCM9 118 aa6.05□□□□□ -1.44
LTBP3-217ENST00000530785 LCE1AQ5T7P2 110 aa6□□□□□ -1.45
LTBP3-217ENST00000530785 DSTQ03001 7570 aaKnown RBP5.97□□□□□ -1.45
LTBP3-217ENST00000530785 SPRR2EP22531 72 aa5.97□□□□□ -1.45
LTBP3-217ENST00000530785 SPRR2BP35325 72 aa5.97□□□□□ -1.45
LTBP3-217ENST00000530785 SPRR2AP35326 72 aa5.97□□□□□ -1.45
LTBP3-217ENST00000530785 NEBP20929 6669 aa5.83□□□□□ -1.48
LTBP3-217ENST00000530785 KRTAP2-2Q9BYT5 123 aa5.74□□□□□ -1.49
LTBP3-217ENST00000530785 SPRR2DP22532 72 aa5.73□□□□□ -1.49
LTBP3-217ENST00000530785 MT1AP04731 61 aa5.62□□□□□ -1.51
LTBP3-217ENST00000530785 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
LTBP3-217ENST00000530785 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.51
LTBP3-217ENST00000530785 KRTAP6-1Q3LI64 71 aa5.57□□□□□ -1.52
LTBP3-217ENST00000530785 KRTAP5-5Q701N2 237 aaPredicted RBP5.51□□□□□ -1.53
LTBP3-217ENST00000530785 PRM1P04553 51 aa5.5□□□□□ -1.53
LTBP3-217ENST00000530785 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
LTBP3-217ENST00000530785 LCE3EQ5T5B0 92 aa5.46□□□□□ -1.54
LTBP3-217ENST00000530785 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
LTBP3-217ENST00000530785 KRTAP20-1Q3LI63 56 aa5.34□□□□□ -1.56
LTBP3-217ENST00000530785 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
LTBP3-217ENST00000530785 LCE1EQ5T753 118 aa5.2□□□□□ -1.58
LTBP3-217ENST00000530785 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
LTBP3-217ENST00000530785 KRTAP5-4Q6L8H1 288 aa5.13□□□□□ -1.59
LTBP3-217ENST00000530785 MT4P47944 62 aa5.05□□□□□ -1.6
LTBP3-217ENST00000530785 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
LTBP3-217ENST00000530785 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
LTBP3-217ENST00000530785 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
LTBP3-217ENST00000530785 MT3P25713 68 aa4.97□□□□□ -1.61
LTBP3-217ENST00000530785 HMCN1Q96RW7 5635 aa4.96□□□□□ -1.62
LTBP3-217ENST00000530785 KRTAP20-2Q3LI61 65 aa4.83□□□□□ -1.64
LTBP3-217ENST00000530785 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
LTBP3-217ENST00000530785 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
LTBP3-217ENST00000530785 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
LTBP3-217ENST00000530785 LCE1FQ5T754 118 aa4.62□□□□□ -1.67
LTBP3-217ENST00000530785 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.71
LTBP3-217ENST00000530785 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
LTBP3-217ENST00000530785 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
LTBP3-217ENST00000530785 MUC5ACP98088 5654 aa4.13□□□□□ -1.75
LTBP3-217ENST00000530785 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
LTBP3-217ENST00000530785 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
LTBP3-217ENST00000530785 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
LTBP3-217ENST00000530785 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
LTBP3-217ENST00000530785 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
LTBP3-217ENST00000530785 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
LTBP3-217ENST00000530785 KRTAP5-7Q6L8G8 165 aa3.85□□□□□ -1.79
LTBP3-217ENST00000530785 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
LTBP3-217ENST00000530785 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
LTBP3-217ENST00000530785 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
LTBP3-217ENST00000530785 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
LTBP3-217ENST00000530785 KRTAP21-1Q3LI58 79 aa3.57□□□□□ -1.84
LTBP3-217ENST00000530785 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.84
LTBP3-217ENST00000530785 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
LTBP3-217ENST00000530785 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
LTBP3-217ENST00000530785 AHNAKQ09666 5890 aaKnown RBP3.3□□□□□ -1.88
LTBP3-217ENST00000530785 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
LTBP3-217ENST00000530785 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
LTBP3-217ENST00000530785 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 70.1 ms