RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 C20orf197Q8N268 126 aa2.7□□□□□ -1.98
CSDE1-213ENST00000530784 PRO0628Q9UI54 55 aa2.7□□□□□ -1.98
CSDE1-213ENST00000530784 NDUFC1O43677 76 aa2.69□□□□□ -1.98
CSDE1-213ENST00000530784 MP68P56378 58 aa2.69□□□□□ -1.98
CSDE1-213ENST00000530784 CYP4F30PQ9H0H9 118 aa2.69□□□□□ -1.98
CSDE1-213ENST00000530784 PRO2289Q9P1D8 64 aa2.69□□□□□ -1.98
CSDE1-213ENST00000530784 H0Y9P7 68 aa2.68□□□□□ -1.98
CSDE1-213ENST00000530784 LOC101927531A0A1B0GV80 90 aa2.67□□□□□ -1.98
CSDE1-213ENST00000530784 H0YAA0 97 aa2.67□□□□□ -1.98
CSDE1-213ENST00000530784 H7BZZ5 65 aa2.67□□□□□ -1.98
CSDE1-213ENST00000530784 CYSTM1Q9H1C7 97 aa2.67□□□□□ -1.98
CSDE1-213ENST00000530784 A8MUN3 132 aa2.66□□□□□ -1.98
CSDE1-213ENST00000530784 KRTAP8-1Q8IUC2 63 aa2.66□□□□□ -1.98
CSDE1-213ENST00000530784 LINC00208Q96KT6 92 aa2.66□□□□□ -1.98
CSDE1-213ENST00000530784 SNURFQ9Y675 71 aa2.66□□□□□ -1.98
CSDE1-213ENST00000530784 TMEM258P61165 79 aa2.65□□□□□ -1.99
CSDE1-213ENST00000530784 MT1XP80297 61 aa2.64□□□□□ -1.99
CSDE1-213ENST00000530784 ATP5EP56381 51 aaPredicted RBP2.63□□□□□ -1.99
CSDE1-213ENST00000530784 PLAC4Q8WY50 150 aa2.63□□□□□ -1.99
CSDE1-213ENST00000530784 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
CSDE1-213ENST00000530784 K7ERS5 55 aa2.61□□□□□ -1.99
CSDE1-213ENST00000530784 SPRR2DP22532 72 aa2.61□□□□□ -1.99
CSDE1-213ENST00000530784 KRTAP25-1Q3LHN0 102 aa2.61□□□□□ -1.99
CSDE1-213ENST00000530784 RPS28P62857 69 aaKnown RBP2.58□□□□□ -2
CSDE1-213ENST00000530784 M0QZ58 72 aa2.57□□□□□ -2
CSDE1-213ENST00000530784 DMAC1Q96GE9 116 aa2.57□□□□□ -2
CSDE1-213ENST00000530784 SERP1Q9Y6X1 66 aa2.56□□□□□ -2
CSDE1-213ENST00000530784 LINC01554Q52M75 96 aa2.54□□□□□ -2
CSDE1-213ENST00000530784 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
CSDE1-213ENST00000530784 ACYP2P14621 99 aa2.53□□□□□ -2
CSDE1-213ENST00000530784 COA5Q86WW8 74 aa2.52□□□□□ -2.01
CSDE1-213ENST00000530784 A0A1B0GU33 70 aa2.5□□□□□ -2.01
CSDE1-213ENST00000530784 V9GYY9 64 aa2.5□□□□□ -2.01
CSDE1-213ENST00000530784 CHKB-CPT1BH3BT56 60 aa2.46□□□□□ -2.02
CSDE1-213ENST00000530784 Q1T7F1 81 aa2.46□□□□□ -2.02
CSDE1-213ENST00000530784 KRTAP13-4Q3LI77 160 aa2.45□□□□□ -2.02
CSDE1-213ENST00000530784 SPTSSBQ8NFR3 76 aa2.45□□□□□ -2.02
CSDE1-213ENST00000530784 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
CSDE1-213ENST00000530784 LINC01558Q9Y6Z2 57 aa2.44□□□□□ -2.02
CSDE1-213ENST00000530784 A6NED7 52 aa2.4□□□□□ -2.03
CSDE1-213ENST00000530784 A0A1B0GU69 56 aa2.37□□□□□ -2.03
CSDE1-213ENST00000530784 KRTAP19-7Q3SYF9 63 aa2.37□□□□□ -2.03
CSDE1-213ENST00000530784 KRTAP19-3Q7Z4W3 81 aa2.37□□□□□ -2.03
CSDE1-213ENST00000530784 PRR15LQ9BU68 103 aa2.37□□□□□ -2.03
CSDE1-213ENST00000530784 MT1EP04732 61 aa2.36□□□□□ -2.03
CSDE1-213ENST00000530784 KRTAP12-1P59990 96 aa2.33□□□□□ -2.04
CSDE1-213ENST00000530784 UQCR11O14957 56 aa2.31□□□□□ -2.04
CSDE1-213ENST00000530784 SPATA8Q6RVD6 105 aa2.31□□□□□ -2.04
CSDE1-213ENST00000530784 A0A0D9SG42 100 aa2.29□□□□□ -2.04
CSDE1-213ENST00000530784 MT1GP13640 62 aa2.29□□□□□ -2.04
CSDE1-213ENST00000530784 MT4P47944 62 aa2.29□□□□□ -2.04
CSDE1-213ENST00000530784 CDC42SE1Q9NRR8 79 aa2.29□□□□□ -2.04
CSDE1-213ENST00000530784 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
CSDE1-213ENST00000530784 MIR22HGQ0VDD5 57 aa2.28□□□□□ -2.04
CSDE1-213ENST00000530784 KRTAP19-5Q3LI72 72 aa2.28□□□□□ -2.04
CSDE1-213ENST00000530784 MT1MQ8N339 61 aa2.26□□□□□ -2.05
CSDE1-213ENST00000530784 BRK1Q8WUW1 75 aa2.26□□□□□ -2.05
CSDE1-213ENST00000530784 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
CSDE1-213ENST00000530784 MT1LQ93083 61 aa2.23□□□□□ -2.05
CSDE1-213ENST00000530784 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
CSDE1-213ENST00000530784 C10orf95Q9H7T3 257 aa2.18□□□□□ -2.06
CSDE1-213ENST00000530784 TNP1P09430 55 aa2.14□□□□□ -2.07
CSDE1-213ENST00000530784 PMAIP1Q13794 54 aa2.14□□□□□ -2.07
CSDE1-213ENST00000530784 KRTAP20-2Q3LI61 65 aa2.11□□□□□ -2.07
CSDE1-213ENST00000530784 ROMO1P60602 79 aa2.09□□□□□ -2.07
CSDE1-213ENST00000530784 KTN1-AS1Q86SY8 53 aa2.08□□□□□ -2.08
CSDE1-213ENST00000530784 SYNE1Q8NF91 8797 aaKnown RBP2.06□□□□□ -2.08
CSDE1-213ENST00000530784 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
CSDE1-213ENST00000530784 MT1AP04731 61 aa1.9□□□□□ -2.11
CSDE1-213ENST00000530784 KRTAP6-1Q3LI64 71 aa1.89□□□□□ -2.11
CSDE1-213ENST00000530784 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
CSDE1-213ENST00000530784 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.11
CSDE1-213ENST00000530784 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
CSDE1-213ENST00000530784 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
CSDE1-213ENST00000530784 INE1O15225 51 aa1.35□□□□□ -2.19
CSDE1-213ENST00000530784 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
CSDE1-213ENST00000530784 PRM1P04553 51 aa1.08□□□□□ -2.24
CSDE1-213ENST00000530784 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 13.3 ms