RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 PRAC1Q96KF2 57 aa3.86□□□□□ -1.79
TM9SF1-210ENST00000530563 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
TM9SF1-210ENST00000530563 MT1MQ8N339 61 aa3.83□□□□□ -1.8
TM9SF1-210ENST00000530563 PSPHP1O15172 72 aa3.81□□□□□ -1.8
TM9SF1-210ENST00000530563 KRTAP19-5Q3LI72 72 aa3.8□□□□□ -1.8
TM9SF1-210ENST00000530563 PP632Q6XCG6 107 aa3.8□□□□□ -1.8
TM9SF1-210ENST00000530563 COA5Q86WW8 74 aa3.8□□□□□ -1.8
TM9SF1-210ENST00000530563 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
TM9SF1-210ENST00000530563 CHKB-CPT1BH3BT56 60 aa3.78□□□□□ -1.8
TM9SF1-210ENST00000530563 DMAC1Q96GE9 116 aa3.78□□□□□ -1.8
TM9SF1-210ENST00000530563 LINC01558Q9Y6Z2 57 aa3.78□□□□□ -1.8
TM9SF1-210ENST00000530563 PRR15LQ9BU68 103 aa3.77□□□□□ -1.81
TM9SF1-210ENST00000530563 MT1LQ93083 61 aa3.76□□□□□ -1.81
TM9SF1-210ENST00000530563 CDC42SE1Q9NRR8 79 aa3.75□□□□□ -1.81
TM9SF1-210ENST00000530563 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
TM9SF1-210ENST00000530563 A6NED7 52 aa3.73□□□□□ -1.81
TM9SF1-210ENST00000530563 ACYP2P14621 99 aa3.72□□□□□ -1.81
TM9SF1-210ENST00000530563 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
TM9SF1-210ENST00000530563 A0A0D9SG42 100 aa3.7□□□□□ -1.82
TM9SF1-210ENST00000530563 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
TM9SF1-210ENST00000530563 KRTAP13-4Q3LI77 160 aa3.7□□□□□ -1.82
TM9SF1-210ENST00000530563 CAMK2N1Q7Z7J9 78 aa3.7□□□□□ -1.82
TM9SF1-210ENST00000530563 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
TM9SF1-210ENST00000530563 KRTAP9-4Q9BYQ2 154 aa3.67□□□□□ -1.82
TM9SF1-210ENST00000530563 SPTSSBQ8NFR3 76 aa3.66□□□□□ -1.82
TM9SF1-210ENST00000530563 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
TM9SF1-210ENST00000530563 A8MU10 97 aa3.62□□□□□ -1.83
TM9SF1-210ENST00000530563 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
TM9SF1-210ENST00000530563 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
TM9SF1-210ENST00000530563 SPATA8Q6RVD6 105 aa3.6□□□□□ -1.83
TM9SF1-210ENST00000530563 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
TM9SF1-210ENST00000530563 A0A1B0GU69 56 aa3.59□□□□□ -1.83
TM9SF1-210ENST00000530563 UQCR11O14957 56 aa3.57□□□□□ -1.84
TM9SF1-210ENST00000530563 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
TM9SF1-210ENST00000530563 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
TM9SF1-210ENST00000530563 MIR22HGQ0VDD5 57 aa3.54□□□□□ -1.84
TM9SF1-210ENST00000530563 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
TM9SF1-210ENST00000530563 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
TM9SF1-210ENST00000530563 KRTAP12-4P60329 112 aa3.51□□□□□ -1.85
TM9SF1-210ENST00000530563 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
TM9SF1-210ENST00000530563 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
TM9SF1-210ENST00000530563 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
TM9SF1-210ENST00000530563 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
TM9SF1-210ENST00000530563 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
TM9SF1-210ENST00000530563 SPINT4Q6UDR6 99 aa3.42□□□□□ -1.86
TM9SF1-210ENST00000530563 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
TM9SF1-210ENST00000530563 A0A1B0GU33 70 aa3.38□□□□□ -1.87
TM9SF1-210ENST00000530563 K7ERS5 55 aa3.38□□□□□ -1.87
TM9SF1-210ENST00000530563 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
TM9SF1-210ENST00000530563 KRTAP12-3P60328 96 aa3.34□□□□□ -1.87
TM9SF1-210ENST00000530563 KRTAP25-1Q3LHN0 102 aa3.32□□□□□ -1.88
TM9SF1-210ENST00000530563 TNP1P09430 55 aa3.31□□□□□ -1.88
TM9SF1-210ENST00000530563 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
TM9SF1-210ENST00000530563 ROMO1P60602 79 aa3.25□□□□□ -1.89
TM9SF1-210ENST00000530563 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
TM9SF1-210ENST00000530563 MT1AP04731 61 aa3.17□□□□□ -1.9
TM9SF1-210ENST00000530563 MT3P25713 68 aa3.13□□□□□ -1.91
TM9SF1-210ENST00000530563 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
TM9SF1-210ENST00000530563 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
TM9SF1-210ENST00000530563 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
TM9SF1-210ENST00000530563 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
TM9SF1-210ENST00000530563 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
TM9SF1-210ENST00000530563 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
TM9SF1-210ENST00000530563 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
TM9SF1-210ENST00000530563 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
TM9SF1-210ENST00000530563 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
TM9SF1-210ENST00000530563 INE1O15225 51 aa2.53□□□□□ -2
TM9SF1-210ENST00000530563 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
TM9SF1-210ENST00000530563 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
TM9SF1-210ENST00000530563 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
TM9SF1-210ENST00000530563 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
TM9SF1-210ENST00000530563 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
TM9SF1-210ENST00000530563 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
TM9SF1-210ENST00000530563 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
TM9SF1-210ENST00000530563 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
TM9SF1-210ENST00000530563 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
TM9SF1-210ENST00000530563 PRM1P04553 51 aa1.68□□□□□ -2.14
TM9SF1-210ENST00000530563 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 38.3 ms