RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 KRTAP4-3Q9BYR4 195 aa1.89□□□□□ -2.11
CTSB-216ENST00000530290 KRTAP13-4Q3LI77 160 aa1.88□□□□□ -2.11
CTSB-216ENST00000530290 KRTAP5-5Q701N2 237 aaPredicted RBP1.88□□□□□ -2.11
CTSB-216ENST00000530290 C10orf95Q9H7T3 257 aa1.88□□□□□ -2.11
CTSB-216ENST00000530290 SCGB1A1P11684 91 aa1.85□□□□□ -2.11
CTSB-216ENST00000530290 TNP1P09430 55 aa1.83□□□□□ -2.12
CTSB-216ENST00000530290 SEC61GP60059 68 aa1.82□□□□□ -2.12
CTSB-216ENST00000530290 LCE3AQ5TA76 89 aa1.82□□□□□ -2.12
CTSB-216ENST00000530290 SPINT4Q6UDR6 99 aa1.82□□□□□ -2.12
CTSB-216ENST00000530290 KRTAP23-1A1A580 65 aa1.81□□□□□ -2.12
CTSB-216ENST00000530290 SMIM20Q8N5G0 67 aa1.81□□□□□ -2.12
CTSB-216ENST00000530290 SERP1Q9Y6X1 66 aa1.81□□□□□ -2.12
CTSB-216ENST00000530290 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
CTSB-216ENST00000530290 KRTAP12-1P59990 96 aa1.79□□□□□ -2.12
CTSB-216ENST00000530290 SPANXA2-OT1Q8N9U9 137 aa1.79□□□□□ -2.12
CTSB-216ENST00000530290 SVIPQ8NHG7 77 aa1.79□□□□□ -2.12
CTSB-216ENST00000530290 KRTAP12-3P60328 96 aa1.78□□□□□ -2.12
CTSB-216ENST00000530290 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
CTSB-216ENST00000530290 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.77□□□□□ -2.13
CTSB-216ENST00000530290 SMIM26A0A096LP01 95 aa1.76□□□□□ -2.13
CTSB-216ENST00000530290 A0A1B0GU33 70 aa1.76□□□□□ -2.13
CTSB-216ENST00000530290 PCP4P48539 62 aa1.76□□□□□ -2.13
CTSB-216ENST00000530290 ANAPC13Q9BS18 74 aa1.76□□□□□ -2.13
CTSB-216ENST00000530290 SPATA8Q6RVD6 105 aa1.75□□□□□ -2.13
CTSB-216ENST00000530290 SERP2Q8N6R1 65 aa1.75□□□□□ -2.13
CTSB-216ENST00000530290 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
CTSB-216ENST00000530290 COX7CP15954 63 aa1.73□□□□□ -2.13
CTSB-216ENST00000530290 ATP5EP56381 51 aaPredicted RBP1.71□□□□□ -2.14
CTSB-216ENST00000530290 TMEM258P61165 79 aa1.7□□□□□ -2.14
CTSB-216ENST00000530290 COA5Q86WW8 74 aa1.7□□□□□ -2.14
CTSB-216ENST00000530290 MT1AP04731 61 aa1.69□□□□□ -2.14
CTSB-216ENST00000530290 OBSCNQ5VST9 7968 aa1.68□□□□□ -2.14
CTSB-216ENST00000530290 CCDC179H3BU77 68 aa1.67□□□□□ -2.14
CTSB-216ENST00000530290 SNURFQ9Y675 71 aa1.67□□□□□ -2.14
CTSB-216ENST00000530290 H7BZZ5 65 aa1.66□□□□□ -2.14
CTSB-216ENST00000530290 RPS28P62857 69 aaKnown RBP1.66□□□□□ -2.14
CTSB-216ENST00000530290 KRTAP6-1Q3LI64 71 aa1.65□□□□□ -2.15
CTSB-216ENST00000530290 A0A1B0GU69 56 aa1.64□□□□□ -2.15
CTSB-216ENST00000530290 KRTAP25-1Q3LHN0 102 aa1.64□□□□□ -2.15
CTSB-216ENST00000530290 A8MU10 97 aa1.63□□□□□ -2.15
CTSB-216ENST00000530290 KRTAP6-2Q3LI66 62 aa1.62□□□□□ -2.15
CTSB-216ENST00000530290 KRTAP5-1Q6L8H4 278 aa1.62□□□□□ -2.15
CTSB-216ENST00000530290 LCE3CQ5T5A8 94 aa1.61□□□□□ -2.15
CTSB-216ENST00000530290 LCE1EQ5T753 118 aa1.61□□□□□ -2.15
CTSB-216ENST00000530290 PRR15LQ9BU68 103 aa1.61□□□□□ -2.15
CTSB-216ENST00000530290 V9GYY9 64 aa1.61□□□□□ -2.15
CTSB-216ENST00000530290 MT3P25713 68 aa1.57□□□□□ -2.16
CTSB-216ENST00000530290 Q1T7F1 81 aa1.56□□□□□ -2.16
CTSB-216ENST00000530290 LINC01558Q9Y6Z2 57 aa1.53□□□□□ -2.16
CTSB-216ENST00000530290 K7ERS5 55 aa1.5□□□□□ -2.17
CTSB-216ENST00000530290 UQCR11O14957 56 aa1.49□□□□□ -2.17
CTSB-216ENST00000530290 KRTAP4-4Q9BYR3 166 aa1.49□□□□□ -2.17
CTSB-216ENST00000530290 A6NED7 52 aa1.47□□□□□ -2.17
CTSB-216ENST00000530290 PSPHP1O15172 72 aa1.47□□□□□ -2.17
CTSB-216ENST00000530290 KRTAP9-6A8MVA2 160 aa1.46□□□□□ -2.18
CTSB-216ENST00000530290 CDC42SE1Q9NRR8 79 aa1.46□□□□□ -2.18
CTSB-216ENST00000530290 PRO0628Q9UI54 55 aa1.46□□□□□ -2.18
CTSB-216ENST00000530290 BRK1Q8WUW1 75 aa1.45□□□□□ -2.18
CTSB-216ENST00000530290 MIR22HGQ0VDD5 57 aa1.44□□□□□ -2.18
CTSB-216ENST00000530290 LCE1CQ5T751 118 aa1.4□□□□□ -2.19
CTSB-216ENST00000530290 LCE1BQ5T7P3 118 aa1.4□□□□□ -2.19
CTSB-216ENST00000530290 PMAIP1Q13794 54 aa1.39□□□□□ -2.19
CTSB-216ENST00000530290 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
CTSB-216ENST00000530290 KTN1-AS1Q86SY8 53 aa1.35□□□□□ -2.19
CTSB-216ENST00000530290 LCE1FQ5T754 118 aa1.34□□□□□ -2.19
CTSB-216ENST00000530290 ROMO1P60602 79 aa1.33□□□□□ -2.2
CTSB-216ENST00000530290 A0A0A0MQY5 61 aa1.32□□□□□ -2.2
CTSB-216ENST00000530290 PRAC1Q96KF2 57 aa1.22□□□□□ -2.21
CTSB-216ENST00000530290 LCE3DQ9BYE3 92 aa1.13□□□□□ -2.23
CTSB-216ENST00000530290 LUZP6Q538Z0 58 aa1.12□□□□□ -2.23
CTSB-216ENST00000530290 LCE3EQ5T5B0 92 aa1.12□□□□□ -2.23
CTSB-216ENST00000530290 KRTAP21-2Q3LI59 83 aa1.09□□□□□ -2.23
CTSB-216ENST00000530290 MUC19Q7Z5P9 8384 aa1.05□□□□□ -2.24
CTSB-216ENST00000530290 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
CTSB-216ENST00000530290 NDUFAF8A1L188 74 aa1.01□□□□□ -2.25
CTSB-216ENST00000530290 INE1O15225 51 aa0.92□□□□□ -2.26
CTSB-216ENST00000530290 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
CTSB-216ENST00000530290 PRM1P04553 51 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 5 ms