RNA–Protein interactions for RNA: ENST00000530167.1

H2AFX-202, Transcript of H2A histone family member X, humanhuman

APPRIS P1 BASIC

Gene H2AFX, Length 1,614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-202ENST00000530167 KTN1-AS1Q86SY8 53 aa7.67□□□□□ -1.18
H2AFX-202ENST00000530167 PP632Q6XCG6 107 aa7.67□□□□□ -1.18
H2AFX-202ENST00000530167 KRTAP12-3P60328 96 aa7.64□□□□□ -1.19
H2AFX-202ENST00000530167 PRAC1Q96KF2 57 aa7.63□□□□□ -1.19
H2AFX-202ENST00000530167 KRTAP19-3Q7Z4W3 81 aa7.57□□□□□ -1.2
H2AFX-202ENST00000530167 MT1LQ93083 61 aa7.52□□□□□ -1.21
H2AFX-202ENST00000530167 SPRR2DP22532 72 aa7.51□□□□□ -1.21
H2AFX-202ENST00000530167 LCE5AQ5TCM9 118 aa7.51□□□□□ -1.21
H2AFX-202ENST00000530167 MT1GP13640 62 aa7.46□□□□□ -1.21
H2AFX-202ENST00000530167 KRTAP20-1Q3LI63 56 aa7.36□□□□□ -1.23
H2AFX-202ENST00000530167 MT1MQ8N339 61 aa7.34□□□□□ -1.23
H2AFX-202ENST00000530167 KRTAP15-1Q3LI76 137 aa7.34□□□□□ -1.24
H2AFX-202ENST00000530167 KRTAP2-3P0C7H8 128 aa7.32□□□□□ -1.24
H2AFX-202ENST00000530167 KRTAP2-4Q9BYR9 128 aa7.32□□□□□ -1.24
H2AFX-202ENST00000530167 LCE3BQ5TA77 95 aa7.26□□□□□ -1.25
H2AFX-202ENST00000530167 KRTAP4-7Q9BYR0 210 aa7.21□□□□□ -1.26
H2AFX-202ENST00000530167 KRTAP19-4Q3LI73 84 aa7.19□□□□□ -1.26
H2AFX-202ENST00000530167 KRTAP4-3Q9BYR4 195 aa7.18□□□□□ -1.26
H2AFX-202ENST00000530167 DSTQ03001 7570 aaKnown RBP7.15□□□□□ -1.27
H2AFX-202ENST00000530167 KRTAP2-2Q9BYT5 123 aa7.13□□□□□ -1.27
H2AFX-202ENST00000530167 KRTAP2-1Q9BYU5 128 aa7.13□□□□□ -1.27
H2AFX-202ENST00000530167 LCE3CQ5T5A8 94 aa7.09□□□□□ -1.27
H2AFX-202ENST00000530167 LOC100996750A0A140TA64 210 aa6.8□□□□□ -1.32
H2AFX-202ENST00000530167 KRTAP9-6A8MVA2 160 aa6.68□□□□□ -1.34
H2AFX-202ENST00000530167 KRTAP5-5Q701N2 237 aaPredicted RBP6.66□□□□□ -1.34
H2AFX-202ENST00000530167 LCE4AQ5TA78 99 aa6.65□□□□□ -1.34
H2AFX-202ENST00000530167 SPRR5A0A1B0GTR4 108 aa6.64□□□□□ -1.35
H2AFX-202ENST00000530167 KRTAP5-4Q6L8H1 288 aa6.64□□□□□ -1.35
H2AFX-202ENST00000530167 KRTAP4-9Q9BYQ8 210 aa6.61□□□□□ -1.35
H2AFX-202ENST00000530167 MT4P47944 62 aa6.54□□□□□ -1.36
H2AFX-202ENST00000530167 LCE1DQ5T752 114 aa6.51□□□□□ -1.37
H2AFX-202ENST00000530167 KRTAP4-6Q9BYQ5 205 aa6.41□□□□□ -1.38
H2AFX-202ENST00000530167 MT1AP04731 61 aa6.39□□□□□ -1.39
H2AFX-202ENST00000530167 KRTAP12-4P60329 112 aa6.36□□□□□ -1.39
H2AFX-202ENST00000530167 KRTAP6-1Q3LI64 71 aa6.34□□□□□ -1.39
H2AFX-202ENST00000530167 SYNE1Q8NF91 8797 aaKnown RBP6.33□□□□□ -1.4
H2AFX-202ENST00000530167 LUZP6Q538Z0 58 aa6.3□□□□□ -1.4
H2AFX-202ENST00000530167 HMCN1Q96RW7 5635 aa6.29□□□□□ -1.4
H2AFX-202ENST00000530167 KRTAP20-2Q3LI61 65 aa6.24□□□□□ -1.41
H2AFX-202ENST00000530167 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
H2AFX-202ENST00000530167 KRTAP5-3Q6L8H2 238 aa6.03□□□□□ -1.44
H2AFX-202ENST00000530167 GPR98Q8WXG9 6306 aa6.01□□□□□ -1.45
H2AFX-202ENST00000530167 KRTAP6-2Q3LI66 62 aa5.94□□□□□ -1.46
H2AFX-202ENST00000530167 KRTAP5-2Q701N4 177 aa5.92□□□□□ -1.46
H2AFX-202ENST00000530167 NDUFAF8A1L188 74 aa5.9□□□□□ -1.46
H2AFX-202ENST00000530167 AHNAK2Q8IVF2 5795 aa5.85□□□□□ -1.47
H2AFX-202ENST00000530167 MT3P25713 68 aa5.83□□□□□ -1.48
H2AFX-202ENST00000530167 KRTAP5-10Q6L8G5 202 aa5.72□□□□□ -1.49
H2AFX-202ENST00000530167 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
H2AFX-202ENST00000530167 OBSCNQ5VST9 7968 aa5.47□□□□□ -1.53
H2AFX-202ENST00000530167 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
H2AFX-202ENST00000530167 KRTAP5-8O75690 187 aa5.35□□□□□ -1.55
H2AFX-202ENST00000530167 H3BS24 57 aa5.33□□□□□ -1.56
H2AFX-202ENST00000530167 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
H2AFX-202ENST00000530167 KRTAP5-1Q6L8H4 278 aa5.21□□□□□ -1.58
H2AFX-202ENST00000530167 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
H2AFX-202ENST00000530167 A0A0A0MQY5 61 aa5.11□□□□□ -1.59
H2AFX-202ENST00000530167 LCE3EQ5T5B0 92 aa5.03□□□□□ -1.6
H2AFX-202ENST00000530167 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
H2AFX-202ENST00000530167 MUC5ACP98088 5654 aa4.96□□□□□ -1.62
H2AFX-202ENST00000530167 LCE1BQ5T7P3 118 aa4.89□□□□□ -1.63
H2AFX-202ENST00000530167 INE1O15225 51 aa4.87□□□□□ -1.63
H2AFX-202ENST00000530167 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
H2AFX-202ENST00000530167 LCE1CQ5T751 118 aa4.83□□□□□ -1.64
H2AFX-202ENST00000530167 MUC5BQ9HC84 5762 aaPredicted RBP4.69□□□□□ -1.66
H2AFX-202ENST00000530167 AHNAKQ09666 5890 aaKnown RBP4.57□□□□□ -1.68
H2AFX-202ENST00000530167 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.46□□□□□ -1.7
H2AFX-202ENST00000530167 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
H2AFX-202ENST00000530167 PRM1P04553 51 aa4.23□□□□□ -1.73
H2AFX-202ENST00000530167 KRTAP4-12Q9BQ66 201 aa4.22□□□□□ -1.73
H2AFX-202ENST00000530167 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
H2AFX-202ENST00000530167 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
H2AFX-202ENST00000530167 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
H2AFX-202ENST00000530167 PHGR1C9JFL3 82 aa3.7□□□□□ -1.82
H2AFX-202ENST00000530167 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
H2AFX-202ENST00000530167 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
H2AFX-202ENST00000530167 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 97.3 ms