RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
COPB1-207ENST00000529866 SERP2Q8N6R1 65 aa3.71□□□□□ -1.82
COPB1-207ENST00000529866 SPATA8Q6RVD6 105 aa3.7□□□□□ -1.82
COPB1-207ENST00000529866 KRTAP12-1P59990 96 aa3.67□□□□□ -1.82
COPB1-207ENST00000529866 MT1LQ93083 61 aa3.66□□□□□ -1.82
COPB1-207ENST00000529866 SPINT4Q6UDR6 99 aa3.65□□□□□ -1.83
COPB1-207ENST00000529866 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
COPB1-207ENST00000529866 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
COPB1-207ENST00000529866 A0A1B0GU33 70 aa3.61□□□□□ -1.83
COPB1-207ENST00000529866 SERP1Q9Y6X1 66 aa3.61□□□□□ -1.83
COPB1-207ENST00000529866 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
COPB1-207ENST00000529866 SEC61GP60059 68 aa3.59□□□□□ -1.83
COPB1-207ENST00000529866 H7BZZ5 65 aa3.58□□□□□ -1.84
COPB1-207ENST00000529866 COX7CP15954 63 aa3.58□□□□□ -1.84
COPB1-207ENST00000529866 ANAPC13Q9BS18 74 aa3.58□□□□□ -1.84
COPB1-207ENST00000529866 CCDC179H3BU77 68 aa3.57□□□□□ -1.84
COPB1-207ENST00000529866 A8MU10 97 aa3.56□□□□□ -1.84
COPB1-207ENST00000529866 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
COPB1-207ENST00000529866 KRTAP15-1Q3LI76 137 aa3.54□□□□□ -1.84
COPB1-207ENST00000529866 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
COPB1-207ENST00000529866 KRTAP12-4P60329 112 aa3.51□□□□□ -1.85
COPB1-207ENST00000529866 A0A1B0GU69 56 aa3.49□□□□□ -1.85
COPB1-207ENST00000529866 SMIM26A0A096LP01 95 aa3.47□□□□□ -1.85
COPB1-207ENST00000529866 AHNAKQ09666 5890 aaKnown RBP3.46□□□□□ -1.86
COPB1-207ENST00000529866 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
COPB1-207ENST00000529866 TNP1P09430 55 aa3.44□□□□□ -1.86
COPB1-207ENST00000529866 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
COPB1-207ENST00000529866 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
COPB1-207ENST00000529866 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
COPB1-207ENST00000529866 TMEM258P61165 79 aa3.39□□□□□ -1.87
COPB1-207ENST00000529866 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
COPB1-207ENST00000529866 ATP5EP56381 51 aaPredicted RBP3.33□□□□□ -1.88
COPB1-207ENST00000529866 LINC01558Q9Y6Z2 57 aa3.32□□□□□ -1.88
COPB1-207ENST00000529866 PRR15LQ9BU68 103 aa3.3□□□□□ -1.88
COPB1-207ENST00000529866 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
COPB1-207ENST00000529866 RPS28P62857 69 aaKnown RBP3.27□□□□□ -1.89
COPB1-207ENST00000529866 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
COPB1-207ENST00000529866 UQCR11O14957 56 aa3.22□□□□□ -1.89
COPB1-207ENST00000529866 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
COPB1-207ENST00000529866 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
COPB1-207ENST00000529866 MIR22HGQ0VDD5 57 aa3.16□□□□□ -1.9
COPB1-207ENST00000529866 Q1T7F1 81 aa3.16□□□□□ -1.9
COPB1-207ENST00000529866 MT1AP04731 61 aa3.12□□□□□ -1.91
COPB1-207ENST00000529866 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
COPB1-207ENST00000529866 V9GYY9 64 aa3.1□□□□□ -1.91
COPB1-207ENST00000529866 PSPHP1O15172 72 aa3.09□□□□□ -1.91
COPB1-207ENST00000529866 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
COPB1-207ENST00000529866 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
COPB1-207ENST00000529866 K7ERS5 55 aa3.04□□□□□ -1.92
COPB1-207ENST00000529866 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
COPB1-207ENST00000529866 MT3P25713 68 aa3.01□□□□□ -1.93
COPB1-207ENST00000529866 PRAC1Q96KF2 57 aa3.01□□□□□ -1.93
COPB1-207ENST00000529866 A6NED7 52 aa2.97□□□□□ -1.93
COPB1-207ENST00000529866 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
COPB1-207ENST00000529866 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
COPB1-207ENST00000529866 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
COPB1-207ENST00000529866 CDC42SE1Q9NRR8 79 aa2.93□□□□□ -1.94
COPB1-207ENST00000529866 ROMO1P60602 79 aa2.88□□□□□ -1.95
COPB1-207ENST00000529866 BRK1Q8WUW1 75 aa2.88□□□□□ -1.95
COPB1-207ENST00000529866 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
COPB1-207ENST00000529866 PRO0628Q9UI54 55 aa2.79□□□□□ -1.96
COPB1-207ENST00000529866 PMAIP1Q13794 54 aa2.73□□□□□ -1.97
COPB1-207ENST00000529866 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
COPB1-207ENST00000529866 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
COPB1-207ENST00000529866 KTN1-AS1Q86SY8 53 aa2.59□□□□□ -1.99
COPB1-207ENST00000529866 LCE1CQ5T751 118 aa2.53□□□□□ -2
COPB1-207ENST00000529866 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
COPB1-207ENST00000529866 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
COPB1-207ENST00000529866 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
COPB1-207ENST00000529866 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
COPB1-207ENST00000529866 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
COPB1-207ENST00000529866 LUZP6Q538Z0 58 aa2.04□□□□□ -2.08
COPB1-207ENST00000529866 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
COPB1-207ENST00000529866 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
COPB1-207ENST00000529866 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
COPB1-207ENST00000529866 INE1O15225 51 aa1.62□□□□□ -2.15
COPB1-207ENST00000529866 PRM1P04553 51 aa1.5□□□□□ -2.17
COPB1-207ENST00000529866 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 70.8 ms