RNA–Protein interactions for RNA: ENST00000529759.1

LDLRAD3-204, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-204ENST00000529759 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
LDLRAD3-204ENST00000529759 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
LDLRAD3-204ENST00000529759 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
LDLRAD3-204ENST00000529759 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
LDLRAD3-204ENST00000529759 C10orf95Q9H7T3 257 aa3.7□□□□□ -1.82
LDLRAD3-204ENST00000529759 SMIM26A0A096LP01 95 aa3.69□□□□□ -1.82
LDLRAD3-204ENST00000529759 COX7CP15954 63 aa3.67□□□□□ -1.82
LDLRAD3-204ENST00000529759 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
LDLRAD3-204ENST00000529759 A0A1B0GU69 56 aa3.66□□□□□ -1.82
LDLRAD3-204ENST00000529759 H7BZZ5 65 aa3.66□□□□□ -1.82
LDLRAD3-204ENST00000529759 TNP1P09430 55 aa3.66□□□□□ -1.82
LDLRAD3-204ENST00000529759 A8MU10 97 aa3.65□□□□□ -1.83
LDLRAD3-204ENST00000529759 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
LDLRAD3-204ENST00000529759 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
LDLRAD3-204ENST00000529759 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
LDLRAD3-204ENST00000529759 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
LDLRAD3-204ENST00000529759 PRR15LQ9BU68 103 aa3.51□□□□□ -1.85
LDLRAD3-204ENST00000529759 SYNE1Q8NF91 8797 aaKnown RBP3.47□□□□□ -1.85
LDLRAD3-204ENST00000529759 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
LDLRAD3-204ENST00000529759 ANAPC13Q9BS18 74 aa3.44□□□□□ -1.86
LDLRAD3-204ENST00000529759 ATP5EP56381 51 aaPredicted RBP3.43□□□□□ -1.86
LDLRAD3-204ENST00000529759 LINC01558Q9Y6Z2 57 aa3.43□□□□□ -1.86
LDLRAD3-204ENST00000529759 UQCR11O14957 56 aa3.39□□□□□ -1.87
LDLRAD3-204ENST00000529759 KRTAP25-1Q3LHN0 102 aa3.39□□□□□ -1.87
LDLRAD3-204ENST00000529759 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
LDLRAD3-204ENST00000529759 CCDC179H3BU77 68 aa3.37□□□□□ -1.87
LDLRAD3-204ENST00000529759 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
LDLRAD3-204ENST00000529759 PCP4P48539 62 aa3.35□□□□□ -1.87
LDLRAD3-204ENST00000529759 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
LDLRAD3-204ENST00000529759 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
LDLRAD3-204ENST00000529759 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
LDLRAD3-204ENST00000529759 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
LDLRAD3-204ENST00000529759 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
LDLRAD3-204ENST00000529759 MIR22HGQ0VDD5 57 aa3.28□□□□□ -1.88
LDLRAD3-204ENST00000529759 K7ERS5 55 aa3.27□□□□□ -1.89
LDLRAD3-204ENST00000529759 TMEM258P61165 79 aa3.27□□□□□ -1.89
LDLRAD3-204ENST00000529759 KRTAP15-1Q3LI76 137 aa3.26□□□□□ -1.89
LDLRAD3-204ENST00000529759 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
LDLRAD3-204ENST00000529759 KRTAP23-1A1A580 65 aa3.25□□□□□ -1.89
LDLRAD3-204ENST00000529759 MT1AP04731 61 aa3.22□□□□□ -1.89
LDLRAD3-204ENST00000529759 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
LDLRAD3-204ENST00000529759 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
LDLRAD3-204ENST00000529759 PSPHP1O15172 72 aa3.13□□□□□ -1.91
LDLRAD3-204ENST00000529759 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
LDLRAD3-204ENST00000529759 V9GYY9 64 aa3.12□□□□□ -1.91
LDLRAD3-204ENST00000529759 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
LDLRAD3-204ENST00000529759 Q1T7F1 81 aa3.08□□□□□ -1.92
LDLRAD3-204ENST00000529759 CDC42SE1Q9NRR8 79 aa3.07□□□□□ -1.92
LDLRAD3-204ENST00000529759 RPS28P62857 69 aaKnown RBP3.04□□□□□ -1.92
LDLRAD3-204ENST00000529759 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
LDLRAD3-204ENST00000529759 A6NED7 52 aa3.02□□□□□ -1.93
LDLRAD3-204ENST00000529759 ROMO1P60602 79 aa3□□□□□ -1.93
LDLRAD3-204ENST00000529759 SVIPQ8NHG7 77 aa2.95□□□□□ -1.94
LDLRAD3-204ENST00000529759 MT3P25713 68 aa2.94□□□□□ -1.94
LDLRAD3-204ENST00000529759 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
LDLRAD3-204ENST00000529759 PRO0628Q9UI54 55 aa2.75□□□□□ -1.97
LDLRAD3-204ENST00000529759 BRK1Q8WUW1 75 aa2.67□□□□□ -1.98
LDLRAD3-204ENST00000529759 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
LDLRAD3-204ENST00000529759 PMAIP1Q13794 54 aa2.55□□□□□ -2
LDLRAD3-204ENST00000529759 LCE1CQ5T751 118 aa2.55□□□□□ -2
LDLRAD3-204ENST00000529759 KTN1-AS1Q86SY8 53 aa2.52□□□□□ -2.01
LDLRAD3-204ENST00000529759 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
LDLRAD3-204ENST00000529759 A0A0A0MQY5 61 aa2.36□□□□□ -2.03
LDLRAD3-204ENST00000529759 PRAC1Q96KF2 57 aa2.33□□□□□ -2.04
LDLRAD3-204ENST00000529759 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
LDLRAD3-204ENST00000529759 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
LDLRAD3-204ENST00000529759 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
LDLRAD3-204ENST00000529759 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
LDLRAD3-204ENST00000529759 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
LDLRAD3-204ENST00000529759 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
LDLRAD3-204ENST00000529759 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
LDLRAD3-204ENST00000529759 NDUFAF8A1L188 74 aa2.03□□□□□ -2.08
LDLRAD3-204ENST00000529759 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
LDLRAD3-204ENST00000529759 LUZP6Q538Z0 58 aa1.96□□□□□ -2.1
LDLRAD3-204ENST00000529759 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
LDLRAD3-204ENST00000529759 INE1O15225 51 aa1.67□□□□□ -2.14
LDLRAD3-204ENST00000529759 PRM1P04553 51 aa1.52□□□□□ -2.17
LDLRAD3-204ENST00000529759 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 76.8 ms