RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
SMCO4-205ENST00000529714 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
SMCO4-205ENST00000529714 SPRR2EP22531 72 aa4.98□□□□□ -1.61
SMCO4-205ENST00000529714 SPRR2BP35325 72 aa4.98□□□□□ -1.61
SMCO4-205ENST00000529714 SPRR2AP35326 72 aa4.98□□□□□ -1.61
SMCO4-205ENST00000529714 KRTAP19-3Q7Z4W3 81 aa4.91□□□□□ -1.62
SMCO4-205ENST00000529714 MT1LQ93083 61 aa4.88□□□□□ -1.63
SMCO4-205ENST00000529714 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
SMCO4-205ENST00000529714 MT1GP13640 62 aa4.85□□□□□ -1.63
SMCO4-205ENST00000529714 SPRR2DP22532 72 aa4.81□□□□□ -1.64
SMCO4-205ENST00000529714 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
SMCO4-205ENST00000529714 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
SMCO4-205ENST00000529714 KTN1-AS1Q86SY8 53 aa4.76□□□□□ -1.65
SMCO4-205ENST00000529714 MT1MQ8N339 61 aa4.76□□□□□ -1.65
SMCO4-205ENST00000529714 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
SMCO4-205ENST00000529714 KRTAP2-3P0C7H8 128 aa4.7□□□□□ -1.66
SMCO4-205ENST00000529714 KRTAP20-1Q3LI63 56 aa4.7□□□□□ -1.66
SMCO4-205ENST00000529714 KRTAP2-4Q9BYR9 128 aa4.7□□□□□ -1.66
SMCO4-205ENST00000529714 LCE3BQ5TA77 95 aa4.65□□□□□ -1.67
SMCO4-205ENST00000529714 LCE3CQ5T5A8 94 aa4.63□□□□□ -1.67
SMCO4-205ENST00000529714 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
SMCO4-205ENST00000529714 DSTQ03001 7570 aaKnown RBP4.61□□□□□ -1.67
SMCO4-205ENST00000529714 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
SMCO4-205ENST00000529714 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
SMCO4-205ENST00000529714 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
SMCO4-205ENST00000529714 KRTAP9-9Q9BYP9 154 aa4.36□□□□□ -1.71
SMCO4-205ENST00000529714 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
SMCO4-205ENST00000529714 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
SMCO4-205ENST00000529714 KRTAP5-5Q701N2 237 aaPredicted RBP4.34□□□□□ -1.71
SMCO4-205ENST00000529714 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
SMCO4-205ENST00000529714 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
SMCO4-205ENST00000529714 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
SMCO4-205ENST00000529714 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
SMCO4-205ENST00000529714 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
SMCO4-205ENST00000529714 MT1AP04731 61 aa4.17□□□□□ -1.74
SMCO4-205ENST00000529714 LCE1DQ5T752 114 aa4.17□□□□□ -1.74
SMCO4-205ENST00000529714 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
SMCO4-205ENST00000529714 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
SMCO4-205ENST00000529714 MT4P47944 62 aa4.15□□□□□ -1.75
SMCO4-205ENST00000529714 KRTAP12-4P60329 112 aa4.12□□□□□ -1.75
SMCO4-205ENST00000529714 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
SMCO4-205ENST00000529714 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
SMCO4-205ENST00000529714 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
SMCO4-205ENST00000529714 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
SMCO4-205ENST00000529714 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
SMCO4-205ENST00000529714 AHNAK2Q8IVF2 5795 aa3.88□□□□□ -1.79
SMCO4-205ENST00000529714 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
SMCO4-205ENST00000529714 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
SMCO4-205ENST00000529714 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
SMCO4-205ENST00000529714 MT3P25713 68 aa3.8□□□□□ -1.8
SMCO4-205ENST00000529714 GPR98Q8WXG9 6306 aa3.77□□□□□ -1.81
SMCO4-205ENST00000529714 KRTAP5-10Q6L8G5 202 aa3.67□□□□□ -1.82
SMCO4-205ENST00000529714 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
SMCO4-205ENST00000529714 H3BS24 57 aa3.59□□□□□ -1.83
SMCO4-205ENST00000529714 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
SMCO4-205ENST00000529714 KRTAP5-7Q6L8G8 165 aa3.48□□□□□ -1.85
SMCO4-205ENST00000529714 KRTAP5-8O75690 187 aa3.44□□□□□ -1.86
SMCO4-205ENST00000529714 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
SMCO4-205ENST00000529714 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
SMCO4-205ENST00000529714 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
SMCO4-205ENST00000529714 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
SMCO4-205ENST00000529714 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
SMCO4-205ENST00000529714 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
SMCO4-205ENST00000529714 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
SMCO4-205ENST00000529714 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
SMCO4-205ENST00000529714 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
SMCO4-205ENST00000529714 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
SMCO4-205ENST00000529714 INE1O15225 51 aa3.01□□□□□ -1.93
SMCO4-205ENST00000529714 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
SMCO4-205ENST00000529714 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
SMCO4-205ENST00000529714 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
SMCO4-205ENST00000529714 PRM1P04553 51 aa2.69□□□□□ -1.98
SMCO4-205ENST00000529714 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
SMCO4-205ENST00000529714 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
SMCO4-205ENST00000529714 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
SMCO4-205ENST00000529714 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
SMCO4-205ENST00000529714 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
SMCO4-205ENST00000529714 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 37.7 ms