RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 WFDC13Q8IUB5 93 aa1□□□□□ -2.25
AMBRA1-208ENST00000529558 UBL5Q9BZL1 73 aa0.99□□□□□ -2.25
AMBRA1-208ENST00000529558 C10orf95Q9H7T3 257 aa0.99□□□□□ -2.25
AMBRA1-208ENST00000529558 ATP5EP2Q5VTU8 51 aa0.98□□□□□ -2.25
AMBRA1-208ENST00000529558 MRPL34Q9BQ48 92 aaKnown RBP0.98□□□□□ -2.25
AMBRA1-208ENST00000529558 USH2AO75445 5202 aa0.97□□□□□ -2.25
AMBRA1-208ENST00000529558 SSPOA2VEC9 5147 aa0.96□□□□□ -2.26
AMBRA1-208ENST00000529558 KRTAP5-9P26371 169 aa0.96□□□□□ -2.26
AMBRA1-208ENST00000529558 H0Y9P7 68 aa0.95□□□□□ -2.26
AMBRA1-208ENST00000529558 NDUFB1O75438 58 aa0.95□□□□□ -2.26
AMBRA1-208ENST00000529558 SPINK7P58062 85 aa0.95□□□□□ -2.26
AMBRA1-208ENST00000529558 MT1HP80294 61 aa0.93□□□□□ -2.26
AMBRA1-208ENST00000529558 TP53AIP1Q9HCN2 124 aa0.93□□□□□ -2.26
AMBRA1-208ENST00000529558 COX6B2Q6YFQ2 88 aa0.91□□□□□ -2.26
AMBRA1-208ENST00000529558 FCGBPQ9Y6R7 5405 aaPredicted RBP0.9□□□□□ -2.27
AMBRA1-208ENST00000529558 MT2AP02795 61 aa0.89□□□□□ -2.27
AMBRA1-208ENST00000529558 MT1FP04733 61 aa0.89□□□□□ -2.27
AMBRA1-208ENST00000529558 H1FX-AS1Q4G0G2 97 aa0.89□□□□□ -2.27
AMBRA1-208ENST00000529558 MUC19Q7Z5P9 8384 aa0.89□□□□□ -2.27
AMBRA1-208ENST00000529558 MDN1Q9NU22 5596 aa0.88□□□□□ -2.27
AMBRA1-208ENST00000529558 NEBP20929 6669 aa0.87□□□□□ -2.27
AMBRA1-208ENST00000529558 FSIP2Q5CZC0 6907 aa0.87□□□□□ -2.27
AMBRA1-208ENST00000529558 S4R3F8 94 aa0.86□□□□□ -2.27
AMBRA1-208ENST00000529558 SYNE2Q8WXH0 6885 aaKnown RBP0.85□□□□□ -2.27
AMBRA1-208ENST00000529558 MT1BP07438 61 aa0.85□□□□□ -2.27
AMBRA1-208ENST00000529558 KRTAP21-2Q3LI59 83 aa0.85□□□□□ -2.27
AMBRA1-208ENST00000529558 SPATA8Q6RVD6 105 aa0.85□□□□□ -2.27
AMBRA1-208ENST00000529558 KMT2DO14686 5537 aa0.85□□□□□ -2.27
AMBRA1-208ENST00000529558 KRTAP19-8Q3LI54 63 aa0.84□□□□□ -2.27
AMBRA1-208ENST00000529558 H0YAA0 97 aa0.83□□□□□ -2.28
AMBRA1-208ENST00000529558 SPRR2GQ9BYE4 73 aa0.83□□□□□ -2.28
AMBRA1-208ENST00000529558 MUC12Q9UKN1 5478 aa0.83□□□□□ -2.28
AMBRA1-208ENST00000529558 M0R2T5 61 aa0.82□□□□□ -2.28
AMBRA1-208ENST00000529558 KRTAP5-2Q701N4 177 aa0.82□□□□□ -2.28
AMBRA1-208ENST00000529558 MACF1Q9UPN3 7388 aaKnown RBP0.82□□□□□ -2.28
AMBRA1-208ENST00000529558 MT1XP80297 61 aa0.8□□□□□ -2.28
AMBRA1-208ENST00000529558 KRTAP19-3Q7Z4W3 81 aa0.8□□□□□ -2.28
AMBRA1-208ENST00000529558 A0A1B0GU69 56 aa0.79□□□□□ -2.28
AMBRA1-208ENST00000529558 M0QZ58 72 aa0.79□□□□□ -2.28
AMBRA1-208ENST00000529558 SYNE1Q8NF91 8797 aaKnown RBP0.79□□□□□ -2.28
AMBRA1-208ENST00000529558 KRTAP19-6Q3LI70 58 aa0.78□□□□□ -2.28
AMBRA1-208ENST00000529558 CRIPTQ9P021 101 aa0.77□□□□□ -2.29
AMBRA1-208ENST00000529558 CRCT1Q9UGL9 99 aa0.77□□□□□ -2.29
AMBRA1-208ENST00000529558 HMCN1Q96RW7 5635 aa0.75□□□□□ -2.29
AMBRA1-208ENST00000529558 KRTAP19-7Q3SYF9 63 aa0.73□□□□□ -2.29
AMBRA1-208ENST00000529558 KRTAP5-8O75690 187 aa0.72□□□□□ -2.29
AMBRA1-208ENST00000529558 MT1EP04732 61 aa0.71□□□□□ -2.3
AMBRA1-208ENST00000529558 KRTAP19-5Q3LI72 72 aa0.71□□□□□ -2.3
AMBRA1-208ENST00000529558 AHNAK2Q8IVF2 5795 aa0.7□□□□□ -2.3
AMBRA1-208ENST00000529558 KRTAP2-3P0C7H8 128 aa0.7□□□□□ -2.3
AMBRA1-208ENST00000529558 KRTAP2-4Q9BYR9 128 aa0.7□□□□□ -2.3
AMBRA1-208ENST00000529558 KRTAP2-1Q9BYU5 128 aa0.7□□□□□ -2.3
AMBRA1-208ENST00000529558 KRTAP8-1Q8IUC2 63 aa0.69□□□□□ -2.3
AMBRA1-208ENST00000529558 TNP1P09430 55 aa0.68□□□□□ -2.3
AMBRA1-208ENST00000529558 MT1LQ93083 61 aa0.68□□□□□ -2.3
AMBRA1-208ENST00000529558 GPR98Q8WXG9 6306 aa0.68□□□□□ -2.3
AMBRA1-208ENST00000529558 MT1MQ8N339 61 aa0.66□□□□□ -2.3
AMBRA1-208ENST00000529558 SPRR2FQ96RM1 72 aa0.66□□□□□ -2.3
AMBRA1-208ENST00000529558 DSTQ03001 7570 aaKnown RBP0.66□□□□□ -2.3
AMBRA1-208ENST00000529558 SPRR2EP22531 72 aa0.64□□□□□ -2.31
AMBRA1-208ENST00000529558 SPRR2BP35325 72 aa0.64□□□□□ -2.31
AMBRA1-208ENST00000529558 SPRR2AP35326 72 aa0.64□□□□□ -2.31
AMBRA1-208ENST00000529558 MUC5ACP98088 5654 aa0.63□□□□□ -2.31
AMBRA1-208ENST00000529558 MT1GP13640 62 aa0.63□□□□□ -2.31
AMBRA1-208ENST00000529558 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
AMBRA1-208ENST00000529558 SPRR2DP22532 72 aa0.61□□□□□ -2.31
AMBRA1-208ENST00000529558 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.32
AMBRA1-208ENST00000529558 KRTAP20-1Q3LI63 56 aa0.58□□□□□ -2.32
AMBRA1-208ENST00000529558 KRTAP6-1Q3LI64 71 aa0.58□□□□□ -2.32
AMBRA1-208ENST00000529558 MT1AP04731 61 aa0.57□□□□□ -2.32
AMBRA1-208ENST00000529558 MT4P47944 62 aa0.55□□□□□ -2.32
AMBRA1-208ENST00000529558 KRTAP20-2Q3LI61 65 aa0.54□□□□□ -2.32
AMBRA1-208ENST00000529558 KRTAP6-2Q3LI66 62 aa0.52□□□□□ -2.33
AMBRA1-208ENST00000529558 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
AMBRA1-208ENST00000529558 KRTAP5-10Q6L8G5 202 aa0.51□□□□□ -2.33
AMBRA1-208ENST00000529558 MUC16Q8WXI7 14507 aa0.47□□□□□ -2.33
AMBRA1-208ENST00000529558 PRM1P04553 51 aa0.39□□□□□ -2.35
AMBRA1-208ENST00000529558 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms