RNA–Protein interactions for RNA: ENST00000529216.1

PABPC4-223, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 317 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-223ENST00000529216 TNP1P09430 55 aa3.24□□□□□ -1.89
PABPC4-223ENST00000529216 ROMO1P60602 79 aa3.23□□□□□ -1.89
PABPC4-223ENST00000529216 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
PABPC4-223ENST00000529216 KRTAP25-1Q3LHN0 102 aa3.21□□□□□ -1.9
PABPC4-223ENST00000529216 KTN1-AS1Q86SY8 53 aa3.21□□□□□ -1.9
PABPC4-223ENST00000529216 MACF1Q9UPN3 7388 aaKnown RBP3.2□□□□□ -1.9
PABPC4-223ENST00000529216 KRTAP8-1Q8IUC2 63 aa3.15□□□□□ -1.91
PABPC4-223ENST00000529216 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
PABPC4-223ENST00000529216 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
PABPC4-223ENST00000529216 KMT2DO14686 5537 aa3.11□□□□□ -1.91
PABPC4-223ENST00000529216 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
PABPC4-223ENST00000529216 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
PABPC4-223ENST00000529216 SYNE2Q8WXH0 6885 aaKnown RBP3.07□□□□□ -1.92
PABPC4-223ENST00000529216 KRTAP19-7Q3SYF9 63 aa3.06□□□□□ -1.92
PABPC4-223ENST00000529216 SPRR2FQ96RM1 72 aa3.06□□□□□ -1.92
PABPC4-223ENST00000529216 KRTAP19-5Q3LI72 72 aa3.05□□□□□ -1.92
PABPC4-223ENST00000529216 MT1EP04732 61 aa3.02□□□□□ -1.93
PABPC4-223ENST00000529216 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
PABPC4-223ENST00000529216 LCE1AQ5T7P2 110 aa2.96□□□□□ -1.94
PABPC4-223ENST00000529216 MUC12Q9UKN1 5478 aa2.95□□□□□ -1.94
PABPC4-223ENST00000529216 MDN1Q9NU22 5596 aa2.95□□□□□ -1.94
PABPC4-223ENST00000529216 SPRR2EP22531 72 aa2.95□□□□□ -1.94
PABPC4-223ENST00000529216 SPRR2BP35325 72 aa2.95□□□□□ -1.94
PABPC4-223ENST00000529216 SPRR2AP35326 72 aa2.95□□□□□ -1.94
PABPC4-223ENST00000529216 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
PABPC4-223ENST00000529216 MT1LQ93083 61 aa2.94□□□□□ -1.94
PABPC4-223ENST00000529216 MT1GP13640 62 aa2.9□□□□□ -1.95
PABPC4-223ENST00000529216 NEBP20929 6669 aa2.87□□□□□ -1.95
PABPC4-223ENST00000529216 SPRR2DP22532 72 aa2.86□□□□□ -1.95
PABPC4-223ENST00000529216 MT1MQ8N339 61 aa2.85□□□□□ -1.95
PABPC4-223ENST00000529216 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
PABPC4-223ENST00000529216 KRTAP2-3P0C7H8 128 aa2.75□□□□□ -1.97
PABPC4-223ENST00000529216 KRTAP20-1Q3LI63 56 aa2.75□□□□□ -1.97
PABPC4-223ENST00000529216 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
PABPC4-223ENST00000529216 KRTAP2-4Q9BYR9 128 aa2.75□□□□□ -1.97
PABPC4-223ENST00000529216 MT3P25713 68 aa2.71□□□□□ -1.98
PABPC4-223ENST00000529216 KRTAP2-2Q9BYT5 123 aa2.69□□□□□ -1.98
PABPC4-223ENST00000529216 KRTAP2-1Q9BYU5 128 aa2.69□□□□□ -1.98
PABPC4-223ENST00000529216 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
PABPC4-223ENST00000529216 SPRR5A0A1B0GTR4 108 aa2.65□□□□□ -1.99
PABPC4-223ENST00000529216 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
PABPC4-223ENST00000529216 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
PABPC4-223ENST00000529216 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
PABPC4-223ENST00000529216 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
PABPC4-223ENST00000529216 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
PABPC4-223ENST00000529216 LCE1FQ5T754 118 aa2.54□□□□□ -2
PABPC4-223ENST00000529216 MT1AP04731 61 aa2.5□□□□□ -2.01
PABPC4-223ENST00000529216 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
PABPC4-223ENST00000529216 MT4P47944 62 aa2.46□□□□□ -2.02
PABPC4-223ENST00000529216 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
PABPC4-223ENST00000529216 KRTAP12-4P60329 112 aa2.45□□□□□ -2.02
PABPC4-223ENST00000529216 HMCN1Q96RW7 5635 aa2.42□□□□□ -2.02
PABPC4-223ENST00000529216 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
PABPC4-223ENST00000529216 INE1O15225 51 aa2.36□□□□□ -2.03
PABPC4-223ENST00000529216 SYNE1Q8NF91 8797 aaKnown RBP2.35□□□□□ -2.03
PABPC4-223ENST00000529216 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
PABPC4-223ENST00000529216 KRTAP6-2Q3LI66 62 aa2.29□□□□□ -2.04
PABPC4-223ENST00000529216 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
PABPC4-223ENST00000529216 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
PABPC4-223ENST00000529216 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
PABPC4-223ENST00000529216 KRTAP5-10Q6L8G5 202 aa2.15□□□□□ -2.07
PABPC4-223ENST00000529216 LCE3EQ5T5B0 92 aa2.13□□□□□ -2.07
PABPC4-223ENST00000529216 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.07
PABPC4-223ENST00000529216 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
PABPC4-223ENST00000529216 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
PABPC4-223ENST00000529216 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
PABPC4-223ENST00000529216 OBSCNQ5VST9 7968 aa2□□□□□ -2.09
PABPC4-223ENST00000529216 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
PABPC4-223ENST00000529216 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
PABPC4-223ENST00000529216 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
PABPC4-223ENST00000529216 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
PABPC4-223ENST00000529216 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
PABPC4-223ENST00000529216 PRM1P04553 51 aa1.66□□□□□ -2.14
PABPC4-223ENST00000529216 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
PABPC4-223ENST00000529216 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
PABPC4-223ENST00000529216 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
PABPC4-223ENST00000529216 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
PABPC4-223ENST00000529216 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 7.5 ms