RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 KRTAP4-6Q9BYQ5 205 aa4.79□□□□□ -1.64
HIF3A-212ENST00000529205 A8MU10 97 aa4.77□□□□□ -1.65
HIF3A-212ENST00000529205 RPS28P62857 69 aaKnown RBP4.75□□□□□ -1.65
HIF3A-212ENST00000529205 MT1LQ93083 61 aa4.74□□□□□ -1.65
HIF3A-212ENST00000529205 KRTAP12-1P59990 96 aa4.73□□□□□ -1.65
HIF3A-212ENST00000529205 Q1T7F1 81 aa4.73□□□□□ -1.65
HIF3A-212ENST00000529205 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
HIF3A-212ENST00000529205 PRR15LQ9BU68 103 aa4.73□□□□□ -1.65
HIF3A-212ENST00000529205 SMIM26A0A096LP01 95 aa4.71□□□□□ -1.66
HIF3A-212ENST00000529205 PSPHP1O15172 72 aa4.69□□□□□ -1.66
HIF3A-212ENST00000529205 SPINT4Q6UDR6 99 aa4.69□□□□□ -1.66
HIF3A-212ENST00000529205 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
HIF3A-212ENST00000529205 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
HIF3A-212ENST00000529205 V9GYY9 64 aa4.62□□□□□ -1.67
HIF3A-212ENST00000529205 UQCR11O14957 56 aa4.6□□□□□ -1.67
HIF3A-212ENST00000529205 C10orf95Q9H7T3 257 aa4.59□□□□□ -1.67
HIF3A-212ENST00000529205 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
HIF3A-212ENST00000529205 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
HIF3A-212ENST00000529205 LCE3AQ5TA76 89 aa4.54□□□□□ -1.68
HIF3A-212ENST00000529205 TNP1P09430 55 aa4.52□□□□□ -1.69
HIF3A-212ENST00000529205 KRTAP12-4P60329 112 aa4.51□□□□□ -1.69
HIF3A-212ENST00000529205 A6NED7 52 aa4.47□□□□□ -1.69
HIF3A-212ENST00000529205 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
HIF3A-212ENST00000529205 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
HIF3A-212ENST00000529205 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
HIF3A-212ENST00000529205 CDC42SE1Q9NRR8 79 aa4.37□□□□□ -1.71
HIF3A-212ENST00000529205 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
HIF3A-212ENST00000529205 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
HIF3A-212ENST00000529205 K7ERS5 55 aa4.27□□□□□ -1.73
HIF3A-212ENST00000529205 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
HIF3A-212ENST00000529205 BRK1Q8WUW1 75 aa4.25□□□□□ -1.73
HIF3A-212ENST00000529205 KRTAP25-1Q3LHN0 102 aa4.21□□□□□ -1.74
HIF3A-212ENST00000529205 ROMO1P60602 79 aa4.18□□□□□ -1.74
HIF3A-212ENST00000529205 KRTAP19-4Q3LI73 84 aa4.18□□□□□ -1.74
HIF3A-212ENST00000529205 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
HIF3A-212ENST00000529205 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
HIF3A-212ENST00000529205 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
HIF3A-212ENST00000529205 MUC5ACP98088 5654 aa4.11□□□□□ -1.75
HIF3A-212ENST00000529205 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
HIF3A-212ENST00000529205 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
HIF3A-212ENST00000529205 MT1AP04731 61 aa4.05□□□□□ -1.76
HIF3A-212ENST00000529205 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
HIF3A-212ENST00000529205 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
HIF3A-212ENST00000529205 MUC5BQ9HC84 5762 aaPredicted RBP4.03□□□□□ -1.76
HIF3A-212ENST00000529205 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
HIF3A-212ENST00000529205 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
HIF3A-212ENST00000529205 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
HIF3A-212ENST00000529205 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
HIF3A-212ENST00000529205 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
HIF3A-212ENST00000529205 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
HIF3A-212ENST00000529205 SVIPQ8NHG7 77 aa3.91□□□□□ -1.78
HIF3A-212ENST00000529205 KTN1-AS1Q86SY8 53 aa3.87□□□□□ -1.79
HIF3A-212ENST00000529205 PRAC1Q96KF2 57 aa3.84□□□□□ -1.79
HIF3A-212ENST00000529205 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
HIF3A-212ENST00000529205 MT3P25713 68 aa3.76□□□□□ -1.81
HIF3A-212ENST00000529205 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
HIF3A-212ENST00000529205 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
HIF3A-212ENST00000529205 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
HIF3A-212ENST00000529205 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
HIF3A-212ENST00000529205 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
HIF3A-212ENST00000529205 KRTAP4-12Q9BQ66 201 aa3.17□□□□□ -1.9
HIF3A-212ENST00000529205 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
HIF3A-212ENST00000529205 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
HIF3A-212ENST00000529205 H3BS24 57 aa3□□□□□ -1.93
HIF3A-212ENST00000529205 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
HIF3A-212ENST00000529205 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
HIF3A-212ENST00000529205 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
HIF3A-212ENST00000529205 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
HIF3A-212ENST00000529205 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
HIF3A-212ENST00000529205 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
HIF3A-212ENST00000529205 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
HIF3A-212ENST00000529205 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
HIF3A-212ENST00000529205 INE1O15225 51 aa2.52□□□□□ -2.01
HIF3A-212ENST00000529205 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
HIF3A-212ENST00000529205 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
HIF3A-212ENST00000529205 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
HIF3A-212ENST00000529205 PRM1P04553 51 aa2.2□□□□□ -2.06
HIF3A-212ENST00000529205 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 113.5 ms