RNA–Protein interactions for RNA: ENST00000529098.5

PDZD3-210, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,532 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-210ENST00000529098 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
PDZD3-210ENST00000529098 CRCT1Q9UGL9 99 aa6.02□□□□□ -1.45
PDZD3-210ENST00000529098 FCGBPQ9Y6R7 5405 aaPredicted RBP5.99□□□□□ -1.45
PDZD3-210ENST00000529098 MT1LQ93083 61 aa5.94□□□□□ -1.46
PDZD3-210ENST00000529098 KRTAP19-6Q3LI70 58 aa5.93□□□□□ -1.46
PDZD3-210ENST00000529098 KRTAP12-4P60329 112 aa5.88□□□□□ -1.47
PDZD3-210ENST00000529098 MT1EP04732 61 aa5.84□□□□□ -1.47
PDZD3-210ENST00000529098 MACF1Q9UPN3 7388 aaKnown RBP5.79□□□□□ -1.48
PDZD3-210ENST00000529098 SYNE2Q8WXH0 6885 aaKnown RBP5.71□□□□□ -1.5
PDZD3-210ENST00000529098 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
PDZD3-210ENST00000529098 MUC12Q9UKN1 5478 aa5.62□□□□□ -1.51
PDZD3-210ENST00000529098 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.51
PDZD3-210ENST00000529098 MT1GP13640 62 aa5.59□□□□□ -1.51
PDZD3-210ENST00000529098 KRTAP4-3Q9BYR4 195 aa5.55□□□□□ -1.52
PDZD3-210ENST00000529098 KRTAP9-7A8MTY7 169 aa5.47□□□□□ -1.53
PDZD3-210ENST00000529098 MT1MQ8N339 61 aa5.41□□□□□ -1.54
PDZD3-210ENST00000529098 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
PDZD3-210ENST00000529098 MDN1Q9NU22 5596 aa5.38□□□□□ -1.55
PDZD3-210ENST00000529098 MT1AP04731 61 aa5.36□□□□□ -1.55
PDZD3-210ENST00000529098 KRTAP19-3Q7Z4W3 81 aa5.36□□□□□ -1.55
PDZD3-210ENST00000529098 LCE3BQ5TA77 95 aa5.33□□□□□ -1.56
PDZD3-210ENST00000529098 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
PDZD3-210ENST00000529098 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
PDZD3-210ENST00000529098 KRTAP6-3Q3LI67 103 aa5.29□□□□□ -1.56
PDZD3-210ENST00000529098 PRM1P04553 51 aa5.28□□□□□ -1.56
PDZD3-210ENST00000529098 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
PDZD3-210ENST00000529098 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
PDZD3-210ENST00000529098 LCE5AQ5TCM9 118 aa5.24□□□□□ -1.57
PDZD3-210ENST00000529098 LCE3DQ9BYE3 92 aa5.24□□□□□ -1.57
PDZD3-210ENST00000529098 KRTAP5-9P26371 169 aa5.23□□□□□ -1.57
PDZD3-210ENST00000529098 NEBP20929 6669 aa5.12□□□□□ -1.59
PDZD3-210ENST00000529098 LCE1AQ5T7P2 110 aa5.1□□□□□ -1.59
PDZD3-210ENST00000529098 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.59
PDZD3-210ENST00000529098 SPRR2EP22531 72 aa5.07□□□□□ -1.6
PDZD3-210ENST00000529098 SPRR2BP35325 72 aa5.07□□□□□ -1.6
PDZD3-210ENST00000529098 SPRR2AP35326 72 aa5.07□□□□□ -1.6
PDZD3-210ENST00000529098 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
PDZD3-210ENST00000529098 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.61
PDZD3-210ENST00000529098 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
PDZD3-210ENST00000529098 SPRR2DP22532 72 aa4.89□□□□□ -1.63
PDZD3-210ENST00000529098 KRTAP20-1Q3LI63 56 aa4.77□□□□□ -1.65
PDZD3-210ENST00000529098 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
PDZD3-210ENST00000529098 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
PDZD3-210ENST00000529098 MT3P25713 68 aa4.44□□□□□ -1.7
PDZD3-210ENST00000529098 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
PDZD3-210ENST00000529098 KRTAP5-4Q6L8H1 288 aa4.35□□□□□ -1.71
PDZD3-210ENST00000529098 MT4P47944 62 aa4.33□□□□□ -1.72
PDZD3-210ENST00000529098 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
PDZD3-210ENST00000529098 HMCN1Q96RW7 5635 aa4.31□□□□□ -1.72
PDZD3-210ENST00000529098 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
PDZD3-210ENST00000529098 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
PDZD3-210ENST00000529098 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
PDZD3-210ENST00000529098 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
PDZD3-210ENST00000529098 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
PDZD3-210ENST00000529098 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
PDZD3-210ENST00000529098 AHNAK2Q8IVF2 5795 aa3.91□□□□□ -1.78
PDZD3-210ENST00000529098 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.78
PDZD3-210ENST00000529098 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
PDZD3-210ENST00000529098 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
PDZD3-210ENST00000529098 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
PDZD3-210ENST00000529098 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
PDZD3-210ENST00000529098 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
PDZD3-210ENST00000529098 KRTAP5-7Q6L8G8 165 aa3.5□□□□□ -1.85
PDZD3-210ENST00000529098 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
PDZD3-210ENST00000529098 KRTAP21-1Q3LI58 79 aa3.41□□□□□ -1.86
PDZD3-210ENST00000529098 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
PDZD3-210ENST00000529098 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
PDZD3-210ENST00000529098 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
PDZD3-210ENST00000529098 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
PDZD3-210ENST00000529098 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
PDZD3-210ENST00000529098 KRTAP9-9Q9BYP9 154 aa3.19□□□□□ -1.9
PDZD3-210ENST00000529098 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
PDZD3-210ENST00000529098 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
PDZD3-210ENST00000529098 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
PDZD3-210ENST00000529098 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
PDZD3-210ENST00000529098 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
PDZD3-210ENST00000529098 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
PDZD3-210ENST00000529098 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 55.4 ms