RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 DMAC1Q96GE9 116 aa2.22□□□□□ -2.05
NUP98-215ENST00000529063 HIST1H4AP62805 103 aaKnown RBP2.21□□□□□ -2.06
NUP98-215ENST00000529063 COL5A1-AS1Q5SY13 56 aa2.21□□□□□ -2.06
NUP98-215ENST00000529063 ATP5EP2Q5VTU8 51 aa2.21□□□□□ -2.06
NUP98-215ENST00000529063 F8W1H4 67 aa2.2□□□□□ -2.06
NUP98-215ENST00000529063 CYSTM1Q9H1C7 97 aa2.2□□□□□ -2.06
NUP98-215ENST00000529063 MT-ATP8P03928 68 aa2.19□□□□□ -2.06
NUP98-215ENST00000529063 KRTAP13-4Q3LI77 160 aa2.17□□□□□ -2.06
NUP98-215ENST00000529063 KRTAP5-4Q6L8H1 288 aa2.17□□□□□ -2.06
NUP98-215ENST00000529063 GTF2H5Q6ZYL4 71 aa2.17□□□□□ -2.06
NUP98-215ENST00000529063 MT1GP13640 62 aa2.16□□□□□ -2.06
NUP98-215ENST00000529063 MT1MQ8N339 61 aa2.16□□□□□ -2.06
NUP98-215ENST00000529063 KRTAP19-5Q3LI72 72 aa2.15□□□□□ -2.07
NUP98-215ENST00000529063 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.07
NUP98-215ENST00000529063 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
NUP98-215ENST00000529063 TRAV7A0A075B6U4 112 aa2.14□□□□□ -2.07
NUP98-215ENST00000529063 J3QR89 54 aa2.14□□□□□ -2.07
NUP98-215ENST00000529063 SMIM20Q8N5G0 67 aa2.14□□□□□ -2.07
NUP98-215ENST00000529063 KRTAP4-3Q9BYR4 195 aa2.14□□□□□ -2.07
NUP98-215ENST00000529063 LINC00643Q86TS7 51 aa2.12□□□□□ -2.07
NUP98-215ENST00000529063 MT1LQ93083 61 aa2.12□□□□□ -2.07
NUP98-215ENST00000529063 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
NUP98-215ENST00000529063 TMEM258P61165 79 aa2.11□□□□□ -2.07
NUP98-215ENST00000529063 PP632Q6XCG6 107 aa2.11□□□□□ -2.07
NUP98-215ENST00000529063 A0A0D9SG42 100 aa2.1□□□□□ -2.07
NUP98-215ENST00000529063 KTN1-AS1Q86SY8 53 aa2.09□□□□□ -2.07
NUP98-215ENST00000529063 ACYP2P14621 99 aa2.08□□□□□ -2.08
NUP98-215ENST00000529063 RPS28P62857 69 aaKnown RBP2.08□□□□□ -2.08
NUP98-215ENST00000529063 SPTSSBQ8NFR3 76 aa2.07□□□□□ -2.08
NUP98-215ENST00000529063 KRTAP20-2Q3LI61 65 aa2.05□□□□□ -2.08
NUP98-215ENST00000529063 CHKB-CPT1BH3BT56 60 aa2.03□□□□□ -2.08
NUP98-215ENST00000529063 SYNE1Q8NF91 8797 aaKnown RBP2.03□□□□□ -2.09
NUP98-215ENST00000529063 LCE3AQ5TA76 89 aa2.02□□□□□ -2.09
NUP98-215ENST00000529063 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
NUP98-215ENST00000529063 C10orf95Q9H7T3 257 aa2.02□□□□□ -2.09
NUP98-215ENST00000529063 KRTAP12-1P59990 96 aa2□□□□□ -2.09
NUP98-215ENST00000529063 CCDC179H3BU77 68 aa1.99□□□□□ -2.09
NUP98-215ENST00000529063 SPATA8Q6RVD6 105 aa1.99□□□□□ -2.09
NUP98-215ENST00000529063 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
NUP98-215ENST00000529063 SNURFQ9Y675 71 aa1.96□□□□□ -2.1
NUP98-215ENST00000529063 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
NUP98-215ENST00000529063 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
NUP98-215ENST00000529063 KRTAP12-4P60329 112 aa1.93□□□□□ -2.1
NUP98-215ENST00000529063 Q1T7F1 81 aa1.93□□□□□ -2.1
NUP98-215ENST00000529063 COX7CP15954 63 aa1.92□□□□□ -2.1
NUP98-215ENST00000529063 COA5Q86WW8 74 aa1.92□□□□□ -2.1
NUP98-215ENST00000529063 SERP1Q9Y6X1 66 aa1.92□□□□□ -2.1
NUP98-215ENST00000529063 KRTAP12-3P60328 96 aa1.91□□□□□ -2.1
NUP98-215ENST00000529063 TNP1P09430 55 aa1.9□□□□□ -2.11
NUP98-215ENST00000529063 BRK1Q8WUW1 75 aa1.9□□□□□ -2.11
NUP98-215ENST00000529063 ATP5EP56381 51 aaPredicted RBP1.89□□□□□ -2.11
NUP98-215ENST00000529063 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
NUP98-215ENST00000529063 KRTAP5-2Q701N4 177 aa1.88□□□□□ -2.11
NUP98-215ENST00000529063 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
NUP98-215ENST00000529063 SERP2Q8N6R1 65 aa1.87□□□□□ -2.11
NUP98-215ENST00000529063 OBSCNQ5VST9 7968 aa1.85□□□□□ -2.11
NUP98-215ENST00000529063 ROMO1P60602 79 aa1.84□□□□□ -2.11
NUP98-215ENST00000529063 KRTAP6-1Q3LI64 71 aa1.81□□□□□ -2.12
NUP98-215ENST00000529063 MT1AP04731 61 aa1.8□□□□□ -2.12
NUP98-215ENST00000529063 A0A1B0GU69 56 aa1.79□□□□□ -2.12
NUP98-215ENST00000529063 H7BZZ5 65 aa1.78□□□□□ -2.12
NUP98-215ENST00000529063 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
NUP98-215ENST00000529063 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
NUP98-215ENST00000529063 CDC42SE1Q9NRR8 79 aa1.71□□□□□ -2.14
NUP98-215ENST00000529063 MIR22HGQ0VDD5 57 aa1.67□□□□□ -2.14
NUP98-215ENST00000529063 PRR15LQ9BU68 103 aa1.66□□□□□ -2.14
NUP98-215ENST00000529063 INE1O15225 51 aa1.65□□□□□ -2.15
NUP98-215ENST00000529063 LINC01558Q9Y6Z2 57 aa1.65□□□□□ -2.15
NUP98-215ENST00000529063 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
NUP98-215ENST00000529063 LCE1BQ5T7P3 118 aa1.62□□□□□ -2.15
NUP98-215ENST00000529063 UQCR11O14957 56 aa1.61□□□□□ -2.15
NUP98-215ENST00000529063 KRTAP4-4Q9BYR3 166 aa1.58□□□□□ -2.16
NUP98-215ENST00000529063 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
NUP98-215ENST00000529063 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
NUP98-215ENST00000529063 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
NUP98-215ENST00000529063 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
NUP98-215ENST00000529063 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
NUP98-215ENST00000529063 PRM1P04553 51 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms