RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
CSTF3-208ENST00000528865 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
CSTF3-208ENST00000528865 KRTAP9-7A8MTY7 169 aa3.22□□□□□ -1.89
CSTF3-208ENST00000528865 PRO2289Q9P1D8 64 aa3.21□□□□□ -1.9
CSTF3-208ENST00000528865 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
CSTF3-208ENST00000528865 INE1O15225 51 aa3.09□□□□□ -1.91
CSTF3-208ENST00000528865 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
CSTF3-208ENST00000528865 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
CSTF3-208ENST00000528865 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
CSTF3-208ENST00000528865 USH2AO75445 5202 aa2.92□□□□□ -1.94
CSTF3-208ENST00000528865 MT1EP04732 61 aa2.92□□□□□ -1.94
CSTF3-208ENST00000528865 KRTAP2-3P0C7H8 128 aa2.91□□□□□ -1.94
CSTF3-208ENST00000528865 MT1LQ93083 61 aa2.91□□□□□ -1.94
CSTF3-208ENST00000528865 KRTAP2-4Q9BYR9 128 aa2.91□□□□□ -1.94
CSTF3-208ENST00000528865 KRTAP2-1Q9BYU5 128 aa2.91□□□□□ -1.94
CSTF3-208ENST00000528865 KRTAP19-6Q3LI70 58 aa2.88□□□□□ -1.95
CSTF3-208ENST00000528865 KMT2DO14686 5537 aa2.84□□□□□ -1.96
CSTF3-208ENST00000528865 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
CSTF3-208ENST00000528865 SSPOA2VEC9 5147 aa2.79□□□□□ -1.96
CSTF3-208ENST00000528865 MT1GP13640 62 aa2.73□□□□□ -1.97
CSTF3-208ENST00000528865 MT3P25713 68 aa2.72□□□□□ -1.97
CSTF3-208ENST00000528865 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
CSTF3-208ENST00000528865 MT1MQ8N339 61 aa2.71□□□□□ -1.98
CSTF3-208ENST00000528865 KRTAP4-3Q9BYR4 195 aa2.69□□□□□ -1.98
CSTF3-208ENST00000528865 LCE1AQ5T7P2 110 aa2.61□□□□□ -1.99
CSTF3-208ENST00000528865 FCGBPQ9Y6R7 5405 aaPredicted RBP2.56□□□□□ -2
CSTF3-208ENST00000528865 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
CSTF3-208ENST00000528865 SPRR2FQ96RM1 72 aa2.53□□□□□ -2
CSTF3-208ENST00000528865 KRTAP12-4P60329 112 aa2.51□□□□□ -2.01
CSTF3-208ENST00000528865 MT1AP04731 61 aa2.5□□□□□ -2.01
CSTF3-208ENST00000528865 CRCT1Q9UGL9 99 aa2.5□□□□□ -2.01
CSTF3-208ENST00000528865 MUC12Q9UKN1 5478 aa2.49□□□□□ -2.01
CSTF3-208ENST00000528865 KRTAP5-9P26371 169 aa2.47□□□□□ -2.01
CSTF3-208ENST00000528865 FSIP2Q5CZC0 6907 aa2.45□□□□□ -2.02
CSTF3-208ENST00000528865 MACF1Q9UPN3 7388 aaKnown RBP2.45□□□□□ -2.02
CSTF3-208ENST00000528865 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
CSTF3-208ENST00000528865 SYNE1Q8NF91 8797 aaKnown RBP2.43□□□□□ -2.02
CSTF3-208ENST00000528865 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
CSTF3-208ENST00000528865 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
CSTF3-208ENST00000528865 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
CSTF3-208ENST00000528865 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
CSTF3-208ENST00000528865 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
CSTF3-208ENST00000528865 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
CSTF3-208ENST00000528865 DSTQ03001 7570 aaKnown RBP2.35□□□□□ -2.03
CSTF3-208ENST00000528865 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
CSTF3-208ENST00000528865 SPRR2EP22531 72 aa2.32□□□□□ -2.04
CSTF3-208ENST00000528865 SPRR2BP35325 72 aa2.32□□□□□ -2.04
CSTF3-208ENST00000528865 SPRR2AP35326 72 aa2.32□□□□□ -2.04
CSTF3-208ENST00000528865 KRTAP2-2Q9BYT5 123 aa2.32□□□□□ -2.04
CSTF3-208ENST00000528865 SYNE2Q8WXH0 6885 aaKnown RBP2.29□□□□□ -2.04
CSTF3-208ENST00000528865 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
CSTF3-208ENST00000528865 SPRR2DP22532 72 aa2.22□□□□□ -2.05
CSTF3-208ENST00000528865 PRM1P04553 51 aa2.21□□□□□ -2.06
CSTF3-208ENST00000528865 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
CSTF3-208ENST00000528865 KRTAP6-2Q3LI66 62 aa2.17□□□□□ -2.06
CSTF3-208ENST00000528865 LCE1EQ5T753 118 aa2.15□□□□□ -2.07
CSTF3-208ENST00000528865 NEBP20929 6669 aa2.09□□□□□ -2.07
CSTF3-208ENST00000528865 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
CSTF3-208ENST00000528865 OBSCNQ5VST9 7968 aa2.06□□□□□ -2.08
CSTF3-208ENST00000528865 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
CSTF3-208ENST00000528865 MT4P47944 62 aa1.92□□□□□ -2.1
CSTF3-208ENST00000528865 KRTAP20-1Q3LI63 56 aa1.89□□□□□ -2.11
CSTF3-208ENST00000528865 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
CSTF3-208ENST00000528865 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
CSTF3-208ENST00000528865 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
CSTF3-208ENST00000528865 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
CSTF3-208ENST00000528865 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
CSTF3-208ENST00000528865 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
CSTF3-208ENST00000528865 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
CSTF3-208ENST00000528865 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
CSTF3-208ENST00000528865 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
CSTF3-208ENST00000528865 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
CSTF3-208ENST00000528865 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
CSTF3-208ENST00000528865 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
CSTF3-208ENST00000528865 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
CSTF3-208ENST00000528865 MUC19Q7Z5P9 8384 aa1.22□□□□□ -2.21
CSTF3-208ENST00000528865 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
CSTF3-208ENST00000528865 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 327.7 ms