RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840		A0A0A0MQY5	61 aa		3.99	□□□□□ -1.77
PTP4A2-211	ENST00000528840	KRTAP5-4	Q6L8H1	288 aa		3.99	□□□□□ -1.77
PTP4A2-211	ENST00000528840	SPANXA2-OT1	Q8N9U9	137 aa		3.99	□□□□□ -1.77
PTP4A2-211	ENST00000528840	SERP1	Q9Y6X1	66 aa		3.98	□□□□□ -1.77
PTP4A2-211	ENST00000528840	SEC61G	P60059	68 aa		3.97	□□□□□ -1.77
PTP4A2-211	ENST00000528840	KRTAP12-1	P59990	96 aa		3.94	□□□□□ -1.78
PTP4A2-211	ENST00000528840	KRTAP5-11	Q6L8G4	156 aa		3.94	□□□□□ -1.78
PTP4A2-211	ENST00000528840		A0A1B0GU33	70 aa		3.93	□□□□□ -1.78
PTP4A2-211	ENST00000528840	MT3	P25713	68 aa		3.91	□□□□□ -1.78
PTP4A2-211	ENST00000528840	COA5	Q86WW8	74 aa		3.91	□□□□□ -1.78
PTP4A2-211	ENST00000528840	C10orf95	Q9H7T3	257 aa		3.91	□□□□□ -1.78
PTP4A2-211	ENST00000528840	LCE3A	Q5TA76	89 aa		3.89	□□□□□ -1.79
PTP4A2-211	ENST00000528840	KRTAP5-7	Q6L8G8	165 aa		3.88	□□□□□ -1.79
PTP4A2-211	ENST00000528840	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.85	□□□□□ -1.79
PTP4A2-211	ENST00000528840	TNP1	P09430	55 aa		3.84	□□□□□ -1.79
PTP4A2-211	ENST00000528840	LCE1E	Q5T753	118 aa		3.84	□□□□□ -1.79
PTP4A2-211	ENST00000528840	SERP2	Q8N6R1	65 aa		3.84	□□□□□ -1.79
PTP4A2-211	ENST00000528840	SMIM26	A0A096LP01	95 aa		3.8	□□□□□ -1.8
PTP4A2-211	ENST00000528840		A8MU10	97 aa		3.8	□□□□□ -1.8
PTP4A2-211	ENST00000528840		K7ERU9	68 aa		3.79	□□□□□ -1.8
PTP4A2-211	ENST00000528840	KRTAP20-2	Q3LI61	65 aa		3.79	□□□□□ -1.8
PTP4A2-211	ENST00000528840	SPRR5	A0A1B0GTR4	108 aa		3.78	□□□□□ -1.8
PTP4A2-211	ENST00000528840		A0A1B0GU69	56 aa		3.74	□□□□□ -1.81
PTP4A2-211	ENST00000528840	KRTAP12-3	P60328	96 aa		3.74	□□□□□ -1.81
PTP4A2-211	ENST00000528840	KRTAP12-4	P60329	112 aa		3.73	□□□□□ -1.81
PTP4A2-211	ENST00000528840	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.72	□□□□□ -1.81
PTP4A2-211	ENST00000528840		H7BZZ5	65 aa		3.64	□□□□□ -1.83
PTP4A2-211	ENST00000528840	COX7C	P15954	63 aa		3.64	□□□□□ -1.83
PTP4A2-211	ENST00000528840	LCE1F	Q5T754	118 aa		3.62	□□□□□ -1.83
PTP4A2-211	ENST00000528840	SYNE1	Q8NF91	8797 aa	Known RBP	3.58	□□□□□ -1.84
PTP4A2-211	ENST00000528840	PRR15L	Q9BU68	103 aa		3.53	□□□□□ -1.84
PTP4A2-211	ENST00000528840	KRTAP25-1	Q3LHN0	102 aa		3.47	□□□□□ -1.85
PTP4A2-211	ENST00000528840	KRTAP9-6	A8MVA2	160 aa		3.46	□□□□□ -1.86
PTP4A2-211	ENST00000528840	KRTAP5-2	Q701N4	177 aa		3.44	□□□□□ -1.86
PTP4A2-211	ENST00000528840	LINC01558	Q9Y6Z2	57 aa		3.44	□□□□□ -1.86
PTP4A2-211	ENST00000528840	LCE3C	Q5T5A8	94 aa		3.43	□□□□□ -1.86
PTP4A2-211	ENST00000528840	KRTAP5-8	O75690	187 aa		3.42	□□□□□ -1.86
PTP4A2-211	ENST00000528840	KRTAP6-1	Q3LI64	71 aa		3.42	□□□□□ -1.86
PTP4A2-211	ENST00000528840	UQCR11	O14957	56 aa		3.41	□□□□□ -1.86
PTP4A2-211	ENST00000528840	MT1A	P04731	61 aa		3.4	□□□□□ -1.87
PTP4A2-211	ENST00000528840	KRTAP5-1	Q6L8H4	278 aa		3.38	□□□□□ -1.87
PTP4A2-211	ENST00000528840	ANAPC13	Q9BS18	74 aa		3.37	□□□□□ -1.87
PTP4A2-211	ENST00000528840	CCDC179	H3BU77	68 aa		3.33	□□□□□ -1.88
PTP4A2-211	ENST00000528840	MIR22HG	Q0VDD5	57 aa		3.33	□□□□□ -1.88
PTP4A2-211	ENST00000528840	ATP5E	P56381	51 aa	Predicted RBP	3.32	□□□□□ -1.88
PTP4A2-211	ENST00000528840	KRTAP6-2	Q3LI66	62 aa		3.32	□□□□□ -1.88
PTP4A2-211	ENST00000528840	AHNAK	Q09666	5890 aa	Known RBP	3.32	□□□□□ -1.88
PTP4A2-211	ENST00000528840	MUC5AC	P98088	5654 aa		3.31	□□□□□ -1.88
PTP4A2-211	ENST00000528840		K7ERS5	55 aa		3.31	□□□□□ -1.88
PTP4A2-211	ENST00000528840	PRAC1	Q96KF2	57 aa		3.3	□□□□□ -1.88
PTP4A2-211	ENST00000528840	NDUFAF8	A1L188	74 aa		3.29	□□□□□ -1.88
PTP4A2-211	ENST00000528840	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.26	□□□□□ -1.89
PTP4A2-211	ENST00000528840	KRTAP4-4	Q9BYR3	166 aa		3.22	□□□□□ -1.89
PTP4A2-211	ENST00000528840	OBSCN	Q5VST9	7968 aa		3.22	□□□□□ -1.89
PTP4A2-211	ENST00000528840	TMEM258	P61165	79 aa		3.14	□□□□□ -1.91
PTP4A2-211	ENST00000528840	PSPHP1	O15172	72 aa		3.13	□□□□□ -1.91
PTP4A2-211	ENST00000528840	RPS28	P62857	69 aa	Known RBP	3.13	□□□□□ -1.91
PTP4A2-211	ENST00000528840	LCE3E	Q5T5B0	92 aa		3.12	□□□□□ -1.91
PTP4A2-211	ENST00000528840		Q1T7F1	81 aa		3.1	□□□□□ -1.91
PTP4A2-211	ENST00000528840	CDC42SE1	Q9NRR8	79 aa		3.09	□□□□□ -1.91
PTP4A2-211	ENST00000528840		V9GYY9	64 aa		3.05	□□□□□ -1.92
PTP4A2-211	ENST00000528840	ROMO1	P60602	79 aa		3.04	□□□□□ -1.92
PTP4A2-211	ENST00000528840		A6NED7	52 aa		3	□□□□□ -1.93
PTP4A2-211	ENST00000528840	LCE1B	Q5T7P3	118 aa		2.83	□□□□□ -1.96
PTP4A2-211	ENST00000528840	LCE1C	Q5T751	118 aa		2.71	□□□□□ -1.98
PTP4A2-211	ENST00000528840	PRO0628	Q9UI54	55 aa		2.53	□□□□□ -2
PTP4A2-211	ENST00000528840	LCE3D	Q9BYE3	92 aa		2.51	□□□□□ -2.01
PTP4A2-211	ENST00000528840	LUZP6	Q538Z0	58 aa		2.43	□□□□□ -2.02
PTP4A2-211	ENST00000528840	PHGR1	C9JFL3	82 aa		2.37	□□□□□ -2.03
PTP4A2-211	ENST00000528840	KRTAP21-2	Q3LI59	83 aa		2.25	□□□□□ -2.05
PTP4A2-211	ENST00000528840	BRK1	Q8WUW1	75 aa		2.25	□□□□□ -2.05
PTP4A2-211	ENST00000528840	PMAIP1	Q13794	54 aa		2.22	□□□□□ -2.05
PTP4A2-211	ENST00000528840	MUC19	Q7Z5P9	8384 aa		2.14	□□□□□ -2.07
PTP4A2-211	ENST00000528840	KTN1-AS1	Q86SY8	53 aa		1.97	□□□□□ -2.09
PTP4A2-211	ENST00000528840	KRTAP21-1	Q3LI58	79 aa		1.78	□□□□□ -2.12
PTP4A2-211	ENST00000528840	PRM1	P04553	51 aa		1.54	□□□□□ -2.16
PTP4A2-211	ENST00000528840	INE1	O15225	51 aa		1.51	□□□□□ -2.17
PTP4A2-211	ENST00000528840	MUC16	Q8WXI7	14507 aa		1.43	□□□□□ -2.18

Retrieved 78 of 20,778 RNA–protein pairs in 51.3 ms