RNA–Protein interactions for RNA: ENST00000528643.5

FDFT1-212, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-212ENST00000528643 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
FDFT1-212ENST00000528643 USH2AO75445 5202 aa3.41□□□□□ -1.86
FDFT1-212ENST00000528643 PP632Q6XCG6 107 aa3.39□□□□□ -1.87
FDFT1-212ENST00000528643 PRO2289Q9P1D8 64 aa3.32□□□□□ -1.88
FDFT1-212ENST00000528643 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
FDFT1-212ENST00000528643 KRTAP10-7P60409 375 aaPredicted RBP3.31□□□□□ -1.88
FDFT1-212ENST00000528643 SSPOA2VEC9 5147 aa3.3□□□□□ -1.88
FDFT1-212ENST00000528643 KRTAP8-1Q8IUC2 63 aa3.24□□□□□ -1.89
FDFT1-212ENST00000528643 KMT2DO14686 5537 aa3.22□□□□□ -1.89
FDFT1-212ENST00000528643 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
FDFT1-212ENST00000528643 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
FDFT1-212ENST00000528643 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
FDFT1-212ENST00000528643 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.9
FDFT1-212ENST00000528643 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
FDFT1-212ENST00000528643 FCGBPQ9Y6R7 5405 aaPredicted RBP3.12□□□□□ -1.91
FDFT1-212ENST00000528643 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
FDFT1-212ENST00000528643 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
FDFT1-212ENST00000528643 MT1EP04732 61 aa2.99□□□□□ -1.93
FDFT1-212ENST00000528643 MT1LQ93083 61 aa2.95□□□□□ -1.94
FDFT1-212ENST00000528643 MUC12Q9UKN1 5478 aa2.94□□□□□ -1.94
FDFT1-212ENST00000528643 CRCT1Q9UGL9 99 aa2.93□□□□□ -1.94
FDFT1-212ENST00000528643 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
FDFT1-212ENST00000528643 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
FDFT1-212ENST00000528643 KRTAP19-3Q7Z4W3 81 aa2.85□□□□□ -1.95
FDFT1-212ENST00000528643 SPRR2FQ96RM1 72 aa2.85□□□□□ -1.95
FDFT1-212ENST00000528643 SYNE2Q8WXH0 6885 aaKnown RBP2.84□□□□□ -1.96
FDFT1-212ENST00000528643 MT1GP13640 62 aa2.81□□□□□ -1.96
FDFT1-212ENST00000528643 MT1MQ8N339 61 aa2.81□□□□□ -1.96
FDFT1-212ENST00000528643 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
FDFT1-212ENST00000528643 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
FDFT1-212ENST00000528643 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
FDFT1-212ENST00000528643 KRTAP5-9P26371 169 aa2.79□□□□□ -1.96
FDFT1-212ENST00000528643 KRTAP4-3Q9BYR4 195 aa2.79□□□□□ -1.96
FDFT1-212ENST00000528643 INE1O15225 51 aa2.75□□□□□ -1.97
FDFT1-212ENST00000528643 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
FDFT1-212ENST00000528643 DSTQ03001 7570 aaKnown RBP2.71□□□□□ -1.98
FDFT1-212ENST00000528643 SPRR2EP22531 72 aa2.67□□□□□ -1.98
FDFT1-212ENST00000528643 SPRR2BP35325 72 aa2.67□□□□□ -1.98
FDFT1-212ENST00000528643 SPRR2AP35326 72 aa2.67□□□□□ -1.98
FDFT1-212ENST00000528643 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
FDFT1-212ENST00000528643 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
FDFT1-212ENST00000528643 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
FDFT1-212ENST00000528643 KRTAP2-1Q9BYU5 128 aa2.66□□□□□ -1.98
FDFT1-212ENST00000528643 SPRR2DP22532 72 aa2.56□□□□□ -2
FDFT1-212ENST00000528643 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
FDFT1-212ENST00000528643 NEBP20929 6669 aa2.52□□□□□ -2.01
FDFT1-212ENST00000528643 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
FDFT1-212ENST00000528643 MT1AP04731 61 aa2.49□□□□□ -2.01
FDFT1-212ENST00000528643 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
FDFT1-212ENST00000528643 SYNE1Q8NF91 8797 aaKnown RBP2.42□□□□□ -2.02
FDFT1-212ENST00000528643 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
FDFT1-212ENST00000528643 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
FDFT1-212ENST00000528643 KRTAP6-2Q3LI66 62 aa2.27□□□□□ -2.05
FDFT1-212ENST00000528643 MT4P47944 62 aa2.24□□□□□ -2.05
FDFT1-212ENST00000528643 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
FDFT1-212ENST00000528643 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
FDFT1-212ENST00000528643 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
FDFT1-212ENST00000528643 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
FDFT1-212ENST00000528643 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
FDFT1-212ENST00000528643 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
FDFT1-212ENST00000528643 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.06
FDFT1-212ENST00000528643 OBSCNQ5VST9 7968 aa2.13□□□□□ -2.07
FDFT1-212ENST00000528643 PRM1P04553 51 aa1.97□□□□□ -2.09
FDFT1-212ENST00000528643 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
FDFT1-212ENST00000528643 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
FDFT1-212ENST00000528643 LCE1CQ5T751 118 aa1.9□□□□□ -2.11
FDFT1-212ENST00000528643 LCE1BQ5T7P3 118 aa1.9□□□□□ -2.11
FDFT1-212ENST00000528643 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
FDFT1-212ENST00000528643 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
FDFT1-212ENST00000528643 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
FDFT1-212ENST00000528643 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
FDFT1-212ENST00000528643 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
FDFT1-212ENST00000528643 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
FDFT1-212ENST00000528643 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
FDFT1-212ENST00000528643 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
FDFT1-212ENST00000528643 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
FDFT1-212ENST00000528643 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms