RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 PP632Q6XCG6 107 aa4.02□□□□□ -1.77
NR1H3-230ENST00000527949 Q1T7F1 81 aa4□□□□□ -1.77
NR1H3-230ENST00000527949 A8MU10 97 aa3.99□□□□□ -1.77
NR1H3-230ENST00000527949 PSPHP1O15172 72 aa3.98□□□□□ -1.77
NR1H3-230ENST00000527949 TNP1P09430 55 aa3.98□□□□□ -1.77
NR1H3-230ENST00000527949 UQCR11O14957 56 aa3.97□□□□□ -1.77
NR1H3-230ENST00000527949 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.77
NR1H3-230ENST00000527949 MT1LQ93083 61 aa3.96□□□□□ -1.78
NR1H3-230ENST00000527949 C10orf95Q9H7T3 257 aa3.96□□□□□ -1.78
NR1H3-230ENST00000527949 MT1MQ8N339 61 aa3.95□□□□□ -1.78
NR1H3-230ENST00000527949 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
NR1H3-230ENST00000527949 LCE3AQ5TA76 89 aa3.93□□□□□ -1.78
NR1H3-230ENST00000527949 MIR22HGQ0VDD5 57 aa3.91□□□□□ -1.78
NR1H3-230ENST00000527949 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.79
NR1H3-230ENST00000527949 A6NED7 52 aa3.89□□□□□ -1.79
NR1H3-230ENST00000527949 AHNAK2Q8IVF2 5795 aa3.86□□□□□ -1.79
NR1H3-230ENST00000527949 K7ERS5 55 aa3.85□□□□□ -1.79
NR1H3-230ENST00000527949 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
NR1H3-230ENST00000527949 KRTAP4-6Q9BYQ5 205 aa3.85□□□□□ -1.79
NR1H3-230ENST00000527949 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
NR1H3-230ENST00000527949 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
NR1H3-230ENST00000527949 KRTAP25-1Q3LHN0 102 aa3.77□□□□□ -1.81
NR1H3-230ENST00000527949 SPRR5A0A1B0GTR4 108 aa3.76□□□□□ -1.81
NR1H3-230ENST00000527949 KRTAP19-4Q3LI73 84 aa3.75□□□□□ -1.81
NR1H3-230ENST00000527949 CDC42SE1Q9NRR8 79 aa3.74□□□□□ -1.81
NR1H3-230ENST00000527949 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
NR1H3-230ENST00000527949 KRTAP23-1A1A580 65 aa3.69□□□□□ -1.82
NR1H3-230ENST00000527949 KRTAP4-7Q9BYR0 210 aa3.69□□□□□ -1.82
NR1H3-230ENST00000527949 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
NR1H3-230ENST00000527949 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
NR1H3-230ENST00000527949 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
NR1H3-230ENST00000527949 BRK1Q8WUW1 75 aa3.64□□□□□ -1.83
NR1H3-230ENST00000527949 ROMO1P60602 79 aa3.57□□□□□ -1.84
NR1H3-230ENST00000527949 KRTAP15-1Q3LI76 137 aa3.56□□□□□ -1.84
NR1H3-230ENST00000527949 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
NR1H3-230ENST00000527949 LOC100996750A0A140TA64 210 aa3.49□□□□□ -1.85
NR1H3-230ENST00000527949 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
NR1H3-230ENST00000527949 SYNE1Q8NF91 8797 aaKnown RBP3.47□□□□□ -1.85
NR1H3-230ENST00000527949 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
NR1H3-230ENST00000527949 MT1AP04731 61 aa3.39□□□□□ -1.87
NR1H3-230ENST00000527949 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
NR1H3-230ENST00000527949 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
NR1H3-230ENST00000527949 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
NR1H3-230ENST00000527949 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
NR1H3-230ENST00000527949 KTN1-AS1Q86SY8 53 aa3.33□□□□□ -1.88
NR1H3-230ENST00000527949 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
NR1H3-230ENST00000527949 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
NR1H3-230ENST00000527949 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
NR1H3-230ENST00000527949 KRTAP9-4Q9BYQ2 154 aa3.27□□□□□ -1.89
NR1H3-230ENST00000527949 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
NR1H3-230ENST00000527949 H3BS24 57 aa3.26□□□□□ -1.89
NR1H3-230ENST00000527949 PRAC1Q96KF2 57 aa3.21□□□□□ -1.9
NR1H3-230ENST00000527949 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
NR1H3-230ENST00000527949 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
NR1H3-230ENST00000527949 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
NR1H3-230ENST00000527949 MT3P25713 68 aa3.1□□□□□ -1.91
NR1H3-230ENST00000527949 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
NR1H3-230ENST00000527949 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
NR1H3-230ENST00000527949 LUZP6Q538Z0 58 aa2.76□□□□□ -1.97
NR1H3-230ENST00000527949 A0A0A0MQY5 61 aa2.7□□□□□ -1.98
NR1H3-230ENST00000527949 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
NR1H3-230ENST00000527949 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
NR1H3-230ENST00000527949 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
NR1H3-230ENST00000527949 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
NR1H3-230ENST00000527949 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
NR1H3-230ENST00000527949 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
NR1H3-230ENST00000527949 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
NR1H3-230ENST00000527949 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
NR1H3-230ENST00000527949 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
NR1H3-230ENST00000527949 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
NR1H3-230ENST00000527949 INE1O15225 51 aa2.24□□□□□ -2.05
NR1H3-230ENST00000527949 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
NR1H3-230ENST00000527949 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
NR1H3-230ENST00000527949 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
NR1H3-230ENST00000527949 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
NR1H3-230ENST00000527949 PRM1P04553 51 aa1.84□□□□□ -2.11
NR1H3-230ENST00000527949 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 91 ms