RNA–Protein interactions for RNA: ENST00000527769.5

PAX6-221, Transcript of paired box 6, humanhuman

TSL 3

Gene PAX6, Length 487 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-221ENST00000527769 USH2AO75445 5202 aa4.07□□□□□ -1.76
PAX6-221ENST00000527769 TNP1P09430 55 aa4.06□□□□□ -1.76
PAX6-221ENST00000527769 MT1XP80297 61 aa4.06□□□□□ -1.76
PAX6-221ENST00000527769 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
PAX6-221ENST00000527769 C10orf95Q9H7T3 257 aa4.06□□□□□ -1.76
PAX6-221ENST00000527769 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
PAX6-221ENST00000527769 KTN1-AS1Q86SY8 53 aa4□□□□□ -1.77
PAX6-221ENST00000527769 FSIP2Q5CZC0 6907 aa3.97□□□□□ -1.77
PAX6-221ENST00000527769 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
PAX6-221ENST00000527769 CRCT1Q9UGL9 99 aa3.96□□□□□ -1.78
PAX6-221ENST00000527769 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
PAX6-221ENST00000527769 PP632Q6XCG6 107 aa3.95□□□□□ -1.78
PAX6-221ENST00000527769 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
PAX6-221ENST00000527769 FCGBPQ9Y6R7 5405 aaPredicted RBP3.81□□□□□ -1.8
PAX6-221ENST00000527769 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
PAX6-221ENST00000527769 KRTAP8-1Q8IUC2 63 aa3.77□□□□□ -1.81
PAX6-221ENST00000527769 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
PAX6-221ENST00000527769 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
PAX6-221ENST00000527769 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
PAX6-221ENST00000527769 MACF1Q9UPN3 7388 aaKnown RBP3.65□□□□□ -1.83
PAX6-221ENST00000527769 KMT2DO14686 5537 aa3.63□□□□□ -1.83
PAX6-221ENST00000527769 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
PAX6-221ENST00000527769 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
PAX6-221ENST00000527769 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
PAX6-221ENST00000527769 SPRR2FQ96RM1 72 aa3.59□□□□□ -1.83
PAX6-221ENST00000527769 MT1EP04732 61 aa3.58□□□□□ -1.84
PAX6-221ENST00000527769 KRTAP6-3Q3LI67 103 aa3.58□□□□□ -1.84
PAX6-221ENST00000527769 SYNE2Q8WXH0 6885 aaKnown RBP3.54□□□□□ -1.84
PAX6-221ENST00000527769 MT1GP13640 62 aa3.5□□□□□ -1.85
PAX6-221ENST00000527769 KRTAP19-3Q7Z4W3 81 aa3.49□□□□□ -1.85
PAX6-221ENST00000527769 MT1LQ93083 61 aa3.49□□□□□ -1.85
PAX6-221ENST00000527769 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
PAX6-221ENST00000527769 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
PAX6-221ENST00000527769 SPRR2EP22531 72 aa3.44□□□□□ -1.86
PAX6-221ENST00000527769 SPRR2BP35325 72 aa3.44□□□□□ -1.86
PAX6-221ENST00000527769 SPRR2AP35326 72 aa3.44□□□□□ -1.86
PAX6-221ENST00000527769 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
PAX6-221ENST00000527769 MT1MQ8N339 61 aa3.38□□□□□ -1.87
PAX6-221ENST00000527769 SPRR5A0A1B0GTR4 108 aa3.35□□□□□ -1.87
PAX6-221ENST00000527769 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
PAX6-221ENST00000527769 SPRR2DP22532 72 aa3.32□□□□□ -1.88
PAX6-221ENST00000527769 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
PAX6-221ENST00000527769 NEBP20929 6669 aa3.22□□□□□ -1.89
PAX6-221ENST00000527769 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
PAX6-221ENST00000527769 OBSCNQ5VST9 7968 aa3.19□□□□□ -1.9
PAX6-221ENST00000527769 DSTQ03001 7570 aaKnown RBP3.18□□□□□ -1.9
PAX6-221ENST00000527769 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
PAX6-221ENST00000527769 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
PAX6-221ENST00000527769 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
PAX6-221ENST00000527769 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
PAX6-221ENST00000527769 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
PAX6-221ENST00000527769 MT1AP04731 61 aa3□□□□□ -1.93
PAX6-221ENST00000527769 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
PAX6-221ENST00000527769 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
PAX6-221ENST00000527769 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
PAX6-221ENST00000527769 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
PAX6-221ENST00000527769 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
PAX6-221ENST00000527769 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
PAX6-221ENST00000527769 MT4P47944 62 aa2.84□□□□□ -1.95
PAX6-221ENST00000527769 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
PAX6-221ENST00000527769 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
PAX6-221ENST00000527769 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
PAX6-221ENST00000527769 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
PAX6-221ENST00000527769 INE1O15225 51 aa2.63□□□□□ -1.99
PAX6-221ENST00000527769 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
PAX6-221ENST00000527769 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
PAX6-221ENST00000527769 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
PAX6-221ENST00000527769 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
PAX6-221ENST00000527769 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
PAX6-221ENST00000527769 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
PAX6-221ENST00000527769 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
PAX6-221ENST00000527769 PRM1P04553 51 aa2.11□□□□□ -2.07
PAX6-221ENST00000527769 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
PAX6-221ENST00000527769 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
PAX6-221ENST00000527769 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
PAX6-221ENST00000527769 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
PAX6-221ENST00000527769 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
PAX6-221ENST00000527769 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 93.7 ms