RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 KRTAP4-7Q9BYR0 210 aa6.07□□□□□ -1.44
PCDHA6-202ENST00000527624 INE1O15225 51 aa6.02□□□□□ -1.45
PCDHA6-202ENST00000527624 SYNE2Q8WXH0 6885 aaKnown RBP6□□□□□ -1.45
PCDHA6-202ENST00000527624 MUC12Q9UKN1 5478 aa5.99□□□□□ -1.45
PCDHA6-202ENST00000527624 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
PCDHA6-202ENST00000527624 KRTAP9-6A8MVA2 160 aa5.94□□□□□ -1.46
PCDHA6-202ENST00000527624 SPRR2FQ96RM1 72 aa5.89□□□□□ -1.47
PCDHA6-202ENST00000527624 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
PCDHA6-202ENST00000527624 KRTAP19-3Q7Z4W3 81 aa5.86□□□□□ -1.47
PCDHA6-202ENST00000527624 KRTAP4-3Q9BYR4 195 aa5.82□□□□□ -1.48
PCDHA6-202ENST00000527624 MT1GP13640 62 aa5.8□□□□□ -1.48
PCDHA6-202ENST00000527624 MT1MQ8N339 61 aa5.79□□□□□ -1.48
PCDHA6-202ENST00000527624 KRTAP6-3Q3LI67 103 aa5.79□□□□□ -1.48
PCDHA6-202ENST00000527624 LCE5AQ5TCM9 118 aa5.71□□□□□ -1.49
PCDHA6-202ENST00000527624 KRTAP2-3P0C7H8 128 aa5.7□□□□□ -1.5
PCDHA6-202ENST00000527624 KRTAP2-4Q9BYR9 128 aa5.7□□□□□ -1.5
PCDHA6-202ENST00000527624 KRTAP2-1Q9BYU5 128 aa5.7□□□□□ -1.5
PCDHA6-202ENST00000527624 KRTAP5-9P26371 169 aa5.69□□□□□ -1.5
PCDHA6-202ENST00000527624 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
PCDHA6-202ENST00000527624 MDN1Q9NU22 5596 aa5.63□□□□□ -1.51
PCDHA6-202ENST00000527624 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.52
PCDHA6-202ENST00000527624 LCE1AQ5T7P2 110 aa5.55□□□□□ -1.52
PCDHA6-202ENST00000527624 NEBP20929 6669 aa5.52□□□□□ -1.53
PCDHA6-202ENST00000527624 SPRR2EP22531 72 aa5.49□□□□□ -1.53
PCDHA6-202ENST00000527624 SPRR2BP35325 72 aa5.49□□□□□ -1.53
PCDHA6-202ENST00000527624 SPRR2AP35326 72 aa5.49□□□□□ -1.53
PCDHA6-202ENST00000527624 SPRR2DP22532 72 aa5.28□□□□□ -1.56
PCDHA6-202ENST00000527624 KRTAP20-1Q3LI63 56 aa5.17□□□□□ -1.58
PCDHA6-202ENST00000527624 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
PCDHA6-202ENST00000527624 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
PCDHA6-202ENST00000527624 MT1AP04731 61 aa5.13□□□□□ -1.59
PCDHA6-202ENST00000527624 LCE3BQ5TA77 95 aa5.13□□□□□ -1.59
PCDHA6-202ENST00000527624 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
PCDHA6-202ENST00000527624 KRTAP2-2Q9BYT5 123 aa5.01□□□□□ -1.61
PCDHA6-202ENST00000527624 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
PCDHA6-202ENST00000527624 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
PCDHA6-202ENST00000527624 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
PCDHA6-202ENST00000527624 KRTAP5-4Q6L8H1 288 aa4.76□□□□□ -1.65
PCDHA6-202ENST00000527624 LCE3DQ9BYE3 92 aa4.74□□□□□ -1.65
PCDHA6-202ENST00000527624 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
PCDHA6-202ENST00000527624 LCE3EQ5T5B0 92 aa4.66□□□□□ -1.66
PCDHA6-202ENST00000527624 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
PCDHA6-202ENST00000527624 MT3P25713 68 aa4.64□□□□□ -1.67
PCDHA6-202ENST00000527624 MT4P47944 62 aa4.64□□□□□ -1.67
PCDHA6-202ENST00000527624 KRTAP4-6Q9BYQ5 205 aa4.62□□□□□ -1.67
PCDHA6-202ENST00000527624 LCE1DQ5T752 114 aa4.6□□□□□ -1.67
PCDHA6-202ENST00000527624 HMCN1Q96RW7 5635 aa4.56□□□□□ -1.68
PCDHA6-202ENST00000527624 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
PCDHA6-202ENST00000527624 KRTAP20-2Q3LI61 65 aa4.49□□□□□ -1.69
PCDHA6-202ENST00000527624 PRM1P04553 51 aa4.38□□□□□ -1.71
PCDHA6-202ENST00000527624 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
PCDHA6-202ENST00000527624 KRTAP5-3Q6L8H2 238 aa4.29□□□□□ -1.72
PCDHA6-202ENST00000527624 AHNAK2Q8IVF2 5795 aa4.22□□□□□ -1.73
PCDHA6-202ENST00000527624 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
PCDHA6-202ENST00000527624 KRTAP5-10Q6L8G5 202 aa4.03□□□□□ -1.76
PCDHA6-202ENST00000527624 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
PCDHA6-202ENST00000527624 LCE1EQ5T753 118 aa3.9□□□□□ -1.78
PCDHA6-202ENST00000527624 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
PCDHA6-202ENST00000527624 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
PCDHA6-202ENST00000527624 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
PCDHA6-202ENST00000527624 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
PCDHA6-202ENST00000527624 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
PCDHA6-202ENST00000527624 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
PCDHA6-202ENST00000527624 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
PCDHA6-202ENST00000527624 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
PCDHA6-202ENST00000527624 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
PCDHA6-202ENST00000527624 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
PCDHA6-202ENST00000527624 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
PCDHA6-202ENST00000527624 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.88
PCDHA6-202ENST00000527624 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
PCDHA6-202ENST00000527624 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
PCDHA6-202ENST00000527624 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
PCDHA6-202ENST00000527624 LCE1FQ5T754 118 aa3□□□□□ -1.93
PCDHA6-202ENST00000527624 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
PCDHA6-202ENST00000527624 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
PCDHA6-202ENST00000527624 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
PCDHA6-202ENST00000527624 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 64.8 ms