RNA–Protein interactions for RNA: ENST00000527421.5

UBXN1-208, Transcript of UBX domain protein 1, humanhuman

TSL 5

Gene UBXN1, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-208ENST00000527421 MIR22HGQ0VDD5 57 aa6.82□□□□□ -1.32
UBXN1-208ENST00000527421 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
UBXN1-208ENST00000527421 DSTQ03001 7570 aaKnown RBP6.73□□□□□ -1.33
UBXN1-208ENST00000527421 MT1GP13640 62 aa6.72□□□□□ -1.33
UBXN1-208ENST00000527421 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
UBXN1-208ENST00000527421 A6NED7 52 aa6.69□□□□□ -1.34
UBXN1-208ENST00000527421 PP632Q6XCG6 107 aa6.69□□□□□ -1.34
UBXN1-208ENST00000527421 MT1LQ93083 61 aa6.65□□□□□ -1.34
UBXN1-208ENST00000527421 K7ERS5 55 aa6.61□□□□□ -1.35
UBXN1-208ENST00000527421 MT1MQ8N339 61 aa6.61□□□□□ -1.35
UBXN1-208ENST00000527421 KRTAP12-3P60328 96 aa6.51□□□□□ -1.37
UBXN1-208ENST00000527421 LCE1DQ5T752 114 aa6.51□□□□□ -1.37
UBXN1-208ENST00000527421 KRTAP25-1Q3LHN0 102 aa6.5□□□□□ -1.37
UBXN1-208ENST00000527421 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
UBXN1-208ENST00000527421 CDC42SE1Q9NRR8 79 aa6.43□□□□□ -1.38
UBXN1-208ENST00000527421 KRTAP5-10Q6L8G5 202 aa6.36□□□□□ -1.39
UBXN1-208ENST00000527421 HMCN1Q96RW7 5635 aa6.36□□□□□ -1.39
UBXN1-208ENST00000527421 LCE4AQ5TA78 99 aa6.35□□□□□ -1.39
UBXN1-208ENST00000527421 MT4P47944 62 aa6.34□□□□□ -1.39
UBXN1-208ENST00000527421 AHNAK2Q8IVF2 5795 aa6.31□□□□□ -1.4
UBXN1-208ENST00000527421 KRTAP4-7Q9BYR0 210 aa6.31□□□□□ -1.4
UBXN1-208ENST00000527421 KRTAP23-1A1A580 65 aa6.24□□□□□ -1.41
UBXN1-208ENST00000527421 ROMO1P60602 79 aa6.24□□□□□ -1.41
UBXN1-208ENST00000527421 KRTAP5-4Q6L8H1 288 aa6.24□□□□□ -1.41
UBXN1-208ENST00000527421 BRK1Q8WUW1 75 aa6.24□□□□□ -1.41
UBXN1-208ENST00000527421 KRTAP5-7Q6L8G8 165 aa6.2□□□□□ -1.42
UBXN1-208ENST00000527421 KRTAP19-4Q3LI73 84 aa6.14□□□□□ -1.43
UBXN1-208ENST00000527421 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
UBXN1-208ENST00000527421 KRTAP4-6Q9BYQ5 205 aa6.1□□□□□ -1.43
UBXN1-208ENST00000527421 KRTAP5-3Q6L8H2 238 aa6.07□□□□□ -1.44
UBXN1-208ENST00000527421 KRTAP5-5Q701N2 237 aaPredicted RBP6.04□□□□□ -1.44
UBXN1-208ENST00000527421 PRO0628Q9UI54 55 aa6.02□□□□□ -1.45
UBXN1-208ENST00000527421 LCE3CQ5T5A8 94 aa5.99□□□□□ -1.45
UBXN1-208ENST00000527421 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
UBXN1-208ENST00000527421 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
UBXN1-208ENST00000527421 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
UBXN1-208ENST00000527421 KRTAP20-2Q3LI61 65 aa5.89□□□□□ -1.47
UBXN1-208ENST00000527421 KRTAP12-4P60329 112 aa5.88□□□□□ -1.47
UBXN1-208ENST00000527421 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
UBXN1-208ENST00000527421 MT1AP04731 61 aa5.68□□□□□ -1.5
UBXN1-208ENST00000527421 KRTAP9-6A8MVA2 160 aa5.63□□□□□ -1.51
UBXN1-208ENST00000527421 KRTAP6-1Q3LI64 71 aa5.62□□□□□ -1.51
UBXN1-208ENST00000527421 KTN1-AS1Q86SY8 53 aa5.6□□□□□ -1.51
UBXN1-208ENST00000527421 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
UBXN1-208ENST00000527421 KRTAP5-2Q701N4 177 aa5.49□□□□□ -1.53
UBXN1-208ENST00000527421 KRTAP4-11Q9BYQ6 195 aa5.46□□□□□ -1.54
UBXN1-208ENST00000527421 KRTAP9-4Q9BYQ2 154 aa5.45□□□□□ -1.54
UBXN1-208ENST00000527421 AHNAKQ09666 5890 aaKnown RBP5.37□□□□□ -1.55
UBXN1-208ENST00000527421 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
UBXN1-208ENST00000527421 MUC5ACP98088 5654 aa5.35□□□□□ -1.55
UBXN1-208ENST00000527421 KRTAP5-8O75690 187 aa5.3□□□□□ -1.56
UBXN1-208ENST00000527421 MUC5BQ9HC84 5762 aaPredicted RBP5.27□□□□□ -1.57
UBXN1-208ENST00000527421 MT3P25713 68 aa5.18□□□□□ -1.58
UBXN1-208ENST00000527421 A0A0A0MQY5 61 aa5.13□□□□□ -1.59
UBXN1-208ENST00000527421 H3BS24 57 aa5.12□□□□□ -1.59
UBXN1-208ENST00000527421 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
UBXN1-208ENST00000527421 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.6
UBXN1-208ENST00000527421 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
UBXN1-208ENST00000527421 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
UBXN1-208ENST00000527421 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
UBXN1-208ENST00000527421 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
UBXN1-208ENST00000527421 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
UBXN1-208ENST00000527421 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
UBXN1-208ENST00000527421 LCE3DQ9BYE3 92 aa4.34□□□□□ -1.71
UBXN1-208ENST00000527421 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
UBXN1-208ENST00000527421 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
UBXN1-208ENST00000527421 KRTAP4-12Q9BQ66 201 aa4.02□□□□□ -1.77
UBXN1-208ENST00000527421 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
UBXN1-208ENST00000527421 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
UBXN1-208ENST00000527421 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
UBXN1-208ENST00000527421 PHGR1C9JFL3 82 aa3.72□□□□□ -1.81
UBXN1-208ENST00000527421 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
UBXN1-208ENST00000527421 INE1O15225 51 aa3.61□□□□□ -1.83
UBXN1-208ENST00000527421 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
UBXN1-208ENST00000527421 PRM1P04553 51 aa3.22□□□□□ -1.89
UBXN1-208ENST00000527421 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
UBXN1-208ENST00000527421 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
UBXN1-208ENST00000527421 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms