RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 LCE1DQ5T752 114 aa6.97□□□□□ -1.29
PKP3-204ENST00000526971 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
PKP3-204ENST00000526971 HMCN1Q96RW7 5635 aa6.87□□□□□ -1.31
PKP3-204ENST00000526971 PCP4P48539 62 aa6.86□□□□□ -1.31
PKP3-204ENST00000526971 K7ERS5 55 aa6.85□□□□□ -1.31
PKP3-204ENST00000526971 MT1GP13640 62 aa6.84□□□□□ -1.31
PKP3-204ENST00000526971 MT4P47944 62 aa6.82□□□□□ -1.32
PKP3-204ENST00000526971 RPS28P62857 69 aaKnown RBP6.8□□□□□ -1.32
PKP3-204ENST00000526971 MT1LQ93083 61 aa6.79□□□□□ -1.32
PKP3-204ENST00000526971 AHNAK2Q8IVF2 5795 aa6.78□□□□□ -1.32
PKP3-204ENST00000526971 LCE4AQ5TA78 99 aa6.78□□□□□ -1.32
PKP3-204ENST00000526971 PP632Q6XCG6 107 aa6.77□□□□□ -1.33
PKP3-204ENST00000526971 A6NED7 52 aa6.75□□□□□ -1.33
PKP3-204ENST00000526971 KRTAP25-1Q3LHN0 102 aa6.74□□□□□ -1.33
PKP3-204ENST00000526971 MT1MQ8N339 61 aa6.71□□□□□ -1.34
PKP3-204ENST00000526971 KRTAP12-3P60328 96 aa6.68□□□□□ -1.34
PKP3-204ENST00000526971 KRTAP5-10Q6L8G5 202 aa6.68□□□□□ -1.34
PKP3-204ENST00000526971 KRTAP5-4Q6L8H1 288 aa6.64□□□□□ -1.35
PKP3-204ENST00000526971 KRTAP4-6Q9BYQ5 205 aa6.61□□□□□ -1.35
PKP3-204ENST00000526971 KRTAP4-3Q9BYR4 195 aa6.61□□□□□ -1.35
PKP3-204ENST00000526971 CDC42SE1Q9NRR8 79 aa6.51□□□□□ -1.37
PKP3-204ENST00000526971 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
PKP3-204ENST00000526971 KRTAP5-7Q6L8G8 165 aa6.47□□□□□ -1.37
PKP3-204ENST00000526971 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
PKP3-204ENST00000526971 ROMO1P60602 79 aa6.43□□□□□ -1.38
PKP3-204ENST00000526971 KRTAP5-3Q6L8H2 238 aa6.42□□□□□ -1.38
PKP3-204ENST00000526971 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
PKP3-204ENST00000526971 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
PKP3-204ENST00000526971 KRTAP20-2Q3LI61 65 aa6.29□□□□□ -1.4
PKP3-204ENST00000526971 KRTAP5-5Q701N2 237 aaPredicted RBP6.2□□□□□ -1.42
PKP3-204ENST00000526971 LCE3CQ5T5A8 94 aa6.18□□□□□ -1.42
PKP3-204ENST00000526971 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
PKP3-204ENST00000526971 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
PKP3-204ENST00000526971 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
PKP3-204ENST00000526971 KRTAP12-4P60329 112 aa6.05□□□□□ -1.44
PKP3-204ENST00000526971 BRK1Q8WUW1 75 aa5.97□□□□□ -1.45
PKP3-204ENST00000526971 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
PKP3-204ENST00000526971 KRTAP9-6A8MVA2 160 aa5.82□□□□□ -1.48
PKP3-204ENST00000526971 MT1AP04731 61 aa5.78□□□□□ -1.48
PKP3-204ENST00000526971 KRTAP5-2Q701N4 177 aa5.76□□□□□ -1.49
PKP3-204ENST00000526971 KRTAP6-1Q3LI64 71 aa5.73□□□□□ -1.49
PKP3-204ENST00000526971 KRTAP5-8O75690 187 aa5.68□□□□□ -1.5
PKP3-204ENST00000526971 PMAIP1Q13794 54 aa5.63□□□□□ -1.51
PKP3-204ENST00000526971 MUC5BQ9HC84 5762 aaPredicted RBP5.63□□□□□ -1.51
PKP3-204ENST00000526971 AHNAKQ09666 5890 aaKnown RBP5.63□□□□□ -1.51
PKP3-204ENST00000526971 MUC5ACP98088 5654 aa5.62□□□□□ -1.51
PKP3-204ENST00000526971 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
PKP3-204ENST00000526971 OBSCNQ5VST9 7968 aa5.47□□□□□ -1.53
PKP3-204ENST00000526971 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.54
PKP3-204ENST00000526971 PRAC1Q96KF2 57 aa5.39□□□□□ -1.55
PKP3-204ENST00000526971 KRTAP9-9Q9BYP9 154 aa5.39□□□□□ -1.55
PKP3-204ENST00000526971 PRO0628Q9UI54 55 aa5.34□□□□□ -1.55
PKP3-204ENST00000526971 SVIPQ8NHG7 77 aa5.31□□□□□ -1.56
PKP3-204ENST00000526971 MT3P25713 68 aa5.28□□□□□ -1.56
PKP3-204ENST00000526971 KRTAP5-1Q6L8H4 278 aa5.24□□□□□ -1.57
PKP3-204ENST00000526971 KTN1-AS1Q86SY8 53 aa5.07□□□□□ -1.6
PKP3-204ENST00000526971 LCE1EQ5T753 118 aa4.82□□□□□ -1.64
PKP3-204ENST00000526971 KRTAP4-2Q9BYR5 136 aa4.65□□□□□ -1.67
PKP3-204ENST00000526971 LCE1BQ5T7P3 118 aa4.58□□□□□ -1.68
PKP3-204ENST00000526971 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
PKP3-204ENST00000526971 LCE3DQ9BYE3 92 aa4.49□□□□□ -1.69
PKP3-204ENST00000526971 LCE1CQ5T751 118 aa4.47□□□□□ -1.69
PKP3-204ENST00000526971 KRTAP4-12Q9BQ66 201 aa4.37□□□□□ -1.71
PKP3-204ENST00000526971 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
PKP3-204ENST00000526971 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
PKP3-204ENST00000526971 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
PKP3-204ENST00000526971 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
PKP3-204ENST00000526971 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
PKP3-204ENST00000526971 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
PKP3-204ENST00000526971 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
PKP3-204ENST00000526971 H3BS24 57 aa3.67□□□□□ -1.82
PKP3-204ENST00000526971 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
PKP3-204ENST00000526971 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
PKP3-204ENST00000526971 PRM1P04553 51 aa3.29□□□□□ -1.88
PKP3-204ENST00000526971 A0A0A0MQY5 61 aa3.25□□□□□ -1.89
PKP3-204ENST00000526971 INE1O15225 51 aa3.05□□□□□ -1.92
PKP3-204ENST00000526971 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
PKP3-204ENST00000526971 MUC16Q8WXI7 14507 aa2.41□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 56.6 ms