RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 KRTAP6-3Q3LI67 103 aa6.99□□□□□ -1.29
PPP1CA-204ENST00000526510 LCE3CQ5T5A8 94 aa6.94□□□□□ -1.3
PPP1CA-204ENST00000526510 KRTAP19-3Q7Z4W3 81 aa6.94□□□□□ -1.3
PPP1CA-204ENST00000526510 SPRR5A0A1B0GTR4 108 aa6.9□□□□□ -1.3
PPP1CA-204ENST00000526510 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.3
PPP1CA-204ENST00000526510 KRTAP19-4Q3LI73 84 aa6.88□□□□□ -1.31
PPP1CA-204ENST00000526510 MT1GP13640 62 aa6.86□□□□□ -1.31
PPP1CA-204ENST00000526510 LCE5AQ5TCM9 118 aa6.84□□□□□ -1.31
PPP1CA-204ENST00000526510 LCE1AQ5T7P2 110 aa6.84□□□□□ -1.32
PPP1CA-204ENST00000526510 MT1MQ8N339 61 aa6.82□□□□□ -1.32
PPP1CA-204ENST00000526510 MDN1Q9NU22 5596 aa6.79□□□□□ -1.32
PPP1CA-204ENST00000526510 SPRR2EP22531 72 aa6.76□□□□□ -1.33
PPP1CA-204ENST00000526510 SPRR2BP35325 72 aa6.76□□□□□ -1.33
PPP1CA-204ENST00000526510 SPRR2AP35326 72 aa6.76□□□□□ -1.33
PPP1CA-204ENST00000526510 KRTAP4-3Q9BYR4 195 aa6.73□□□□□ -1.33
PPP1CA-204ENST00000526510 KRTAP9-6A8MVA2 160 aa6.64□□□□□ -1.35
PPP1CA-204ENST00000526510 LUZP6Q538Z0 58 aa6.55□□□□□ -1.36
PPP1CA-204ENST00000526510 NEBP20929 6669 aa6.55□□□□□ -1.36
PPP1CA-204ENST00000526510 SPRR2DP22532 72 aa6.5□□□□□ -1.37
PPP1CA-204ENST00000526510 NDUFAF8A1L188 74 aa6.49□□□□□ -1.37
PPP1CA-204ENST00000526510 LOC100996750A0A140TA64 210 aa6.48□□□□□ -1.37
PPP1CA-204ENST00000526510 DSTQ03001 7570 aaKnown RBP6.43□□□□□ -1.38
PPP1CA-204ENST00000526510 LCE3BQ5TA77 95 aa6.26□□□□□ -1.41
PPP1CA-204ENST00000526510 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
PPP1CA-204ENST00000526510 KRTAP20-1Q3LI63 56 aa6.17□□□□□ -1.42
PPP1CA-204ENST00000526510 KRTAP5-5Q701N2 237 aaPredicted RBP6.17□□□□□ -1.42
PPP1CA-204ENST00000526510 KRTAP2-4Q9BYR9 128 aa6.17□□□□□ -1.42
PPP1CA-204ENST00000526510 KRTAP2-1Q9BYU5 128 aa6.05□□□□□ -1.44
PPP1CA-204ENST00000526510 KRTAP2-2Q9BYT5 123 aa6.02□□□□□ -1.45
PPP1CA-204ENST00000526510 MT1AP04731 61 aa6□□□□□ -1.45
PPP1CA-204ENST00000526510 KRTAP6-1Q3LI64 71 aa5.98□□□□□ -1.45
PPP1CA-204ENST00000526510 KRTAP5-4Q6L8H1 288 aa5.9□□□□□ -1.47
PPP1CA-204ENST00000526510 H3BS24 57 aa5.8□□□□□ -1.48
PPP1CA-204ENST00000526510 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
PPP1CA-204ENST00000526510 LCE4AQ5TA78 99 aa5.75□□□□□ -1.49
PPP1CA-204ENST00000526510 KRTAP9-4Q9BYQ2 154 aa5.72□□□□□ -1.49
PPP1CA-204ENST00000526510 A0A0A0MQY5 61 aa5.69□□□□□ -1.5
PPP1CA-204ENST00000526510 MT4P47944 62 aa5.67□□□□□ -1.5
PPP1CA-204ENST00000526510 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
PPP1CA-204ENST00000526510 KRTAP4-6Q9BYQ5 205 aa5.65□□□□□ -1.51
PPP1CA-204ENST00000526510 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.51
PPP1CA-204ENST00000526510 LCE1DQ5T752 114 aa5.59□□□□□ -1.52
PPP1CA-204ENST00000526510 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
PPP1CA-204ENST00000526510 KRTAP6-2Q3LI66 62 aa5.51□□□□□ -1.53
PPP1CA-204ENST00000526510 HMCN1Q96RW7 5635 aa5.5□□□□□ -1.53
PPP1CA-204ENST00000526510 MT3P25713 68 aa5.41□□□□□ -1.54
PPP1CA-204ENST00000526510 INE1O15225 51 aa5.4□□□□□ -1.55
PPP1CA-204ENST00000526510 KRTAP5-2Q701N4 177 aa5.35□□□□□ -1.55
PPP1CA-204ENST00000526510 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.56
PPP1CA-204ENST00000526510 LCE3DQ9BYE3 92 aa5.18□□□□□ -1.58
PPP1CA-204ENST00000526510 LCE3EQ5T5B0 92 aa5.03□□□□□ -1.6
PPP1CA-204ENST00000526510 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
PPP1CA-204ENST00000526510 AHNAK2Q8IVF2 5795 aa4.92□□□□□ -1.62
PPP1CA-204ENST00000526510 GPR98Q8WXG9 6306 aa4.91□□□□□ -1.62
PPP1CA-204ENST00000526510 KRTAP5-10Q6L8G5 202 aa4.81□□□□□ -1.64
PPP1CA-204ENST00000526510 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
PPP1CA-204ENST00000526510 LCE1EQ5T753 118 aa4.71□□□□□ -1.66
PPP1CA-204ENST00000526510 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
PPP1CA-204ENST00000526510 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
PPP1CA-204ENST00000526510 KRTAP5-7Q6L8G8 165 aa4.55□□□□□ -1.68
PPP1CA-204ENST00000526510 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
PPP1CA-204ENST00000526510 LCE1BQ5T7P3 118 aa4.45□□□□□ -1.7
PPP1CA-204ENST00000526510 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
PPP1CA-204ENST00000526510 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
PPP1CA-204ENST00000526510 PRM1P04553 51 aa4.39□□□□□ -1.71
PPP1CA-204ENST00000526510 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.74
PPP1CA-204ENST00000526510 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.13□□□□□ -1.75
PPP1CA-204ENST00000526510 MUC5BQ9HC84 5762 aaPredicted RBP3.99□□□□□ -1.77
PPP1CA-204ENST00000526510 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
PPP1CA-204ENST00000526510 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.79
PPP1CA-204ENST00000526510 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
PPP1CA-204ENST00000526510 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
PPP1CA-204ENST00000526510 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
PPP1CA-204ENST00000526510 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
PPP1CA-204ENST00000526510 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
PPP1CA-204ENST00000526510 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
PPP1CA-204ENST00000526510 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
PPP1CA-204ENST00000526510 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 63.8 ms