RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 RELNP78509 3460 aa0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 VPS13CQ709C8 3753 aa0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 RNF213Q63HN8 5207 aa0□□□□□ -2.41
ECHDC1-219ENST00000526299 ITPR3Q14573 2671 aa0□□□□□ -2.41
ECHDC1-219ENST00000526299 ZZEF1O43149 2961 aa0□□□□□ -2.41
ECHDC1-219ENST00000526299 COL12A1Q99715 3063 aa0□□□□□ -2.41
ECHDC1-219ENST00000526299 LAMA2P24043 3122 aaKnown RBP0□□□□□ -2.41
ECHDC1-219ENST00000526299 RYR3Q15413 4870 aa0□□□□□ -2.41
ECHDC1-219ENST00000526299 LAMA3Q16787 3333 aa0□□□□□ -2.41
ECHDC1-219ENST00000526299 FRYQ5TBA9 3013 aa0□□□□□ -2.41
ECHDC1-219ENST00000526299 MT1MQ8N339 61 aa0□□□□□ -2.41
ECHDC1-219ENST00000526299 CSMD1Q96PZ7 3565 aa0□□□□□ -2.41
ECHDC1-219ENST00000526299 SMG1Q96Q15 3661 aaKnown RBP0□□□□□ -2.41
ECHDC1-219ENST00000526299 CHD7Q9P2D1 2997 aa0□□□□□ -2.41
ECHDC1-219ENST00000526299 STAB2Q8WWQ8 2551 aa-0□□□□□ -2.41
ECHDC1-219ENST00000526299 RYR2Q92736 4967 aa-0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 CEP250Q9BV73 2442 aa-0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 MACF1Q9UPN3 7388 aaKnown RBP-0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 CSMD2Q7Z408 3487 aa-0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 SRCAPQ6ZRS2 3230 aa-0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 ADGRG4Q8IZF6 3080 aa-0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 EPPK1P58107 5090 aaKnown RBP-0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 MAP1AP78559 2803 aaPredicted RBP-0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 ITPR1Q14643 2758 aa-0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 TEX15Q9BXT5 2789 aa-0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 MYO15AQ9UKN7 3530 aa-0.01□□□□□ -2.41
ECHDC1-219ENST00000526299 MGAQ8IWI9 3026 aa-0.02□□□□□ -2.41
ECHDC1-219ENST00000526299 SZT2Q5T011 3432 aa-0.02□□□□□ -2.41
ECHDC1-219ENST00000526299 CFAP46Q8IYW2 2715 aa-0.02□□□□□ -2.41
ECHDC1-219ENST00000526299 MYO9AB2RTY4 2548 aa-0.02□□□□□ -2.41
ECHDC1-219ENST00000526299 EP400Q96L91 3159 aa-0.02□□□□□ -2.41
ECHDC1-219ENST00000526299 DMDP11532 3685 aa-0.02□□□□□ -2.41
ECHDC1-219ENST00000526299 USP34Q70CQ2 3546 aa-0.03□□□□□ -2.41
ECHDC1-219ENST00000526299 XIRP2A4UGR9 3374 aa-0.03□□□□□ -2.41
ECHDC1-219ENST00000526299 TLN1Q9Y490 2541 aaKnown RBP-0.03□□□□□ -2.41
ECHDC1-219ENST00000526299 C5orf42Q9H799 3197 aa-0.03□□□□□ -2.41
ECHDC1-219ENST00000526299 MT1FP04733 61 aa-0.04□□□□□ -2.42
ECHDC1-219ENST00000526299 MT1BP07438 61 aa-0.04□□□□□ -2.42
ECHDC1-219ENST00000526299 NIPBLQ6KC79 2804 aaeCLIP-0.04□□□□□ -2.42
ECHDC1-219ENST00000526299 CEP295Q9C0D2 2601 aa-0.04□□□□□ -2.42
ECHDC1-219ENST00000526299 EYSQ5T1H1 3165 aa-0.04□□□□□ -2.42
ECHDC1-219ENST00000526299 CFAP47Q6ZTR5 3102 aa-0.04□□□□□ -2.42
ECHDC1-219ENST00000526299 CFAP54Q96N23 3096 aa-0.05□□□□□ -2.42
ECHDC1-219ENST00000526299 KIAA1109Q2LD37 5005 aa-0.05□□□□□ -2.42
ECHDC1-219ENST00000526299 LRBAP50851 2863 aa-0.05□□□□□ -2.42
ECHDC1-219ENST00000526299 NEBP20929 6669 aa-0.05□□□□□ -2.42
ECHDC1-219ENST00000526299 WDFY3Q8IZQ1 3526 aa-0.05□□□□□ -2.42
ECHDC1-219ENST00000526299 DMXL2Q8TDJ6 3036 aa-0.05□□□□□ -2.42
ECHDC1-219ENST00000526299 ASPMQ8IZT6 3477 aa-0.06□□□□□ -2.42
ECHDC1-219ENST00000526299 DNAH12Q6ZR08 3092 aa-0.06□□□□□ -2.42
ECHDC1-219ENST00000526299 DCHS1Q96JQ0 3298 aa-0.06□□□□□ -2.42
ECHDC1-219ENST00000526299 CEP350Q5VT06 3117 aa-0.07□□□□□ -2.42
ECHDC1-219ENST00000526299 UNC80Q8N2C7 3258 aa-0.07□□□□□ -2.42
ECHDC1-219ENST00000526299 BRCA2P51587 3418 aa-0.07□□□□□ -2.42
ECHDC1-219ENST00000526299 ABCA13Q86UQ4 5058 aa-0.07□□□□□ -2.42
ECHDC1-219ENST00000526299 VCANP13611 3396 aa-0.07□□□□□ -2.42
ECHDC1-219ENST00000526299 KRTAP19-6Q3LI70 58 aa-0.07□□□□□ -2.42
ECHDC1-219ENST00000526299 SPEGQ15772 3267 aa-0.07□□□□□ -2.42
ECHDC1-219ENST00000526299 CENPEQ02224 2701 aa-0.07□□□□□ -2.42
ECHDC1-219ENST00000526299 DNAH14Q0VDD8 3507 aa-0.07□□□□□ -2.42
ECHDC1-219ENST00000526299 PCNTO95613 3336 aa-0.07□□□□□ -2.42
ECHDC1-219ENST00000526299 ITPR2Q14571 2701 aa-0.07□□□□□ -2.42
ECHDC1-219ENST00000526299 LOC400499M0QZD8 3231 aa-0.08□□□□□ -2.42
ECHDC1-219ENST00000526299 KRTAP19-2Q3LHN2 52 aa-0.08□□□□□ -2.42
ECHDC1-219ENST00000526299 FREM2Q5SZK8 3169 aa-0.08□□□□□ -2.42
ECHDC1-219ENST00000526299 PRUNE2Q8WUY3 3088 aa-0.08□□□□□ -2.42
ECHDC1-219ENST00000526299 CDH23Q9H251 3354 aa-0.08□□□□□ -2.42
ECHDC1-219ENST00000526299 FRYLO94915 3013 aa-0.08□□□□□ -2.42
ECHDC1-219ENST00000526299 UTRNP46939 3433 aa-0.09□□□□□ -2.42
ECHDC1-219ENST00000526299 MKI67P46013 3256 aaKnown RBP-0.09□□□□□ -2.42
ECHDC1-219ENST00000526299 CENPFP49454 3210 aa-0.09□□□□□ -2.42
ECHDC1-219ENST00000526299 MUC3AQ02505 3323 aa-0.09□□□□□ -2.42
ECHDC1-219ENST00000526299 WDFY4Q6ZS81 3184 aa-0.1□□□□□ -2.42
ECHDC1-219ENST00000526299 ATMQ13315 3056 aa-0.1□□□□□ -2.43
ECHDC1-219ENST00000526299 KRTAP20-1Q3LI63 56 aa-0.1□□□□□ -2.43
ECHDC1-219ENST00000526299 BOD1L1Q8NFC6 3051 aa-0.11□□□□□ -2.43
ECHDC1-219ENST00000526299 VPS13AQ96RL7 3174 aa-0.12□□□□□ -2.43
ECHDC1-219ENST00000526299 GOLGB1Q14789 3259 aaKnown RBP-0.12□□□□□ -2.43
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms