RNA–Protein interactions for RNA: ENST00000526124.1

LTBP3-205, Transcript of latent transforming growth factor beta binding protein 3, human

TSL 5

Gene LTBP3, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP3-205	ENST00000526124	PP632	Q6XCG6	107 aa		5.97	□□□□□ -1.45
LTBP3-205	ENST00000526124	KRTAP19-3	Q7Z4W3	81 aa		5.96	□□□□□ -1.46
LTBP3-205	ENST00000526124	PRO0628	Q9UI54	55 aa		5.94	□□□□□ -1.46
LTBP3-205	ENST00000526124	LCE5A	Q5TCM9	118 aa		5.93	□□□□□ -1.46
LTBP3-205	ENST00000526124	MT1L	Q93083	61 aa		5.92	□□□□□ -1.46
LTBP3-205	ENST00000526124	MT1G	P13640	62 aa		5.91	□□□□□ -1.46
LTBP3-205	ENST00000526124	SPRR2D	P22532	72 aa		5.9	□□□□□ -1.46
LTBP3-205	ENST00000526124	KRTAP20-1	Q3LI63	56 aa		5.9	□□□□□ -1.46
LTBP3-205	ENST00000526124	SVIP	Q8NHG7	77 aa		5.89	□□□□□ -1.47
LTBP3-205	ENST00000526124	KRTAP2-3	P0C7H8	128 aa		5.81	□□□□□ -1.48
LTBP3-205	ENST00000526124	KRTAP2-4	Q9BYR9	128 aa		5.81	□□□□□ -1.48
LTBP3-205	ENST00000526124	KRTAP15-1	Q3LI76	137 aa		5.78	□□□□□ -1.48
LTBP3-205	ENST00000526124	MT1M	Q8N339	61 aa		5.78	□□□□□ -1.48
LTBP3-205	ENST00000526124	KRTAP19-4	Q3LI73	84 aa		5.74	□□□□□ -1.49
LTBP3-205	ENST00000526124	LCE3B	Q5TA77	95 aa		5.71	□□□□□ -1.5
LTBP3-205	ENST00000526124	KRTAP4-7	Q9BYR0	210 aa		5.68	□□□□□ -1.5
LTBP3-205	ENST00000526124	KRTAP4-3	Q9BYR4	195 aa		5.65	□□□□□ -1.5
LTBP3-205	ENST00000526124	KRTAP2-2	Q9BYT5	123 aa		5.65	□□□□□ -1.5
LTBP3-205	ENST00000526124	KRTAP2-1	Q9BYU5	128 aa		5.65	□□□□□ -1.5
LTBP3-205	ENST00000526124	PRAC1	Q96KF2	57 aa		5.63	□□□□□ -1.51
LTBP3-205	ENST00000526124	LCE3C	Q5T5A8	94 aa		5.6	□□□□□ -1.51
LTBP3-205	ENST00000526124	KTN1-AS1	Q86SY8	53 aa		5.55	□□□□□ -1.52
LTBP3-205	ENST00000526124	DST	Q03001	7570 aa	Known RBP	5.52	□□□□□ -1.53
LTBP3-205	ENST00000526124	LOC100996750	A0A140TA64	210 aa		5.35	□□□□□ -1.55
LTBP3-205	ENST00000526124	LCE4A	Q5TA78	99 aa		5.27	□□□□□ -1.57
LTBP3-205	ENST00000526124	KRTAP9-6	A8MVA2	160 aa		5.26	□□□□□ -1.57
LTBP3-205	ENST00000526124	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.26	□□□□□ -1.57
LTBP3-205	ENST00000526124	KRTAP5-4	Q6L8H1	288 aa		5.25	□□□□□ -1.57
LTBP3-205	ENST00000526124	KRTAP4-9	Q9BYQ8	210 aa		5.2	□□□□□ -1.58
LTBP3-205	ENST00000526124	MT4	P47944	62 aa		5.12	□□□□□ -1.59
LTBP3-205	ENST00000526124	LCE1D	Q5T752	114 aa		5.12	□□□□□ -1.59
LTBP3-205	ENST00000526124	SPRR5	A0A1B0GTR4	108 aa		5.1	□□□□□ -1.59
LTBP3-205	ENST00000526124	KRTAP4-6	Q9BYQ5	205 aa		5.06	□□□□□ -1.6
LTBP3-205	ENST00000526124	MT1A	P04731	61 aa		5.04	□□□□□ -1.6
LTBP3-205	ENST00000526124	KRTAP12-4	P60329	112 aa		5.01	□□□□□ -1.61
LTBP3-205	ENST00000526124	HMCN1	Q96RW7	5635 aa		5	□□□□□ -1.61
LTBP3-205	ENST00000526124	KRTAP6-1	Q3LI64	71 aa		4.99	□□□□□ -1.61
LTBP3-205	ENST00000526124	GPR98	Q8WXG9	6306 aa		4.97	□□□□□ -1.61
LTBP3-205	ENST00000526124	SYNE1	Q8NF91	8797 aa	Known RBP	4.92	□□□□□ -1.62
LTBP3-205	ENST00000526124	KRTAP20-2	Q3LI61	65 aa		4.91	□□□□□ -1.62
LTBP3-205	ENST00000526124	KRTAP9-4	Q9BYQ2	154 aa		4.86	□□□□□ -1.63
LTBP3-205	ENST00000526124	KRTAP5-3	Q6L8H2	238 aa		4.77	□□□□□ -1.65
LTBP3-205	ENST00000526124	KRTAP6-2	Q3LI66	62 aa		4.68	□□□□□ -1.66
LTBP3-205	ENST00000526124	LUZP6	Q538Z0	58 aa		4.67	□□□□□ -1.66
LTBP3-205	ENST00000526124	KRTAP5-2	Q701N4	177 aa		4.67	□□□□□ -1.66
LTBP3-205	ENST00000526124	AHNAK2	Q8IVF2	5795 aa		4.64	□□□□□ -1.67
LTBP3-205	ENST00000526124	MT3	P25713	68 aa		4.61	□□□□□ -1.67
LTBP3-205	ENST00000526124	KRTAP5-10	Q6L8G5	202 aa		4.6	□□□□□ -1.67
LTBP3-205	ENST00000526124	KRTAP5-7	Q6L8G8	165 aa		4.46	□□□□□ -1.7
LTBP3-205	ENST00000526124	KRTAP4-11	Q9BYQ6	195 aa		4.38	□□□□□ -1.71
LTBP3-205	ENST00000526124	KRTAP5-8	O75690	187 aa		4.23	□□□□□ -1.73
LTBP3-205	ENST00000526124	NDUFAF8	A1L188	74 aa		4.22	□□□□□ -1.73
LTBP3-205	ENST00000526124	OBSCN	Q5VST9	7968 aa		4.19	□□□□□ -1.74
LTBP3-205	ENST00000526124	LCE3D	Q9BYE3	92 aa		4.13	□□□□□ -1.75
LTBP3-205	ENST00000526124	LCE1E	Q5T753	118 aa		4.12	□□□□□ -1.75
LTBP3-205	ENST00000526124	KRTAP5-1	Q6L8H4	278 aa		4.11	□□□□□ -1.75
LTBP3-205	ENST00000526124		H3BS24	57 aa		3.99	□□□□□ -1.77
LTBP3-205	ENST00000526124	LCE3E	Q5T5B0	92 aa		3.97	□□□□□ -1.77
LTBP3-205	ENST00000526124	MUC5AC	P98088	5654 aa		3.96	□□□□□ -1.78
LTBP3-205	ENST00000526124	KRTAP9-9	Q9BYP9	154 aa		3.91	□□□□□ -1.78
LTBP3-205	ENST00000526124	AHNAK	Q09666	5890 aa	Known RBP	3.87	□□□□□ -1.79
LTBP3-205	ENST00000526124	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.84	□□□□□ -1.79
LTBP3-205	ENST00000526124		A0A0A0MQY5	61 aa		3.84	□□□□□ -1.79
LTBP3-205	ENST00000526124	LCE1C	Q5T751	118 aa		3.83	□□□□□ -1.8
LTBP3-205	ENST00000526124	LCE1B	Q5T7P3	118 aa		3.83	□□□□□ -1.8
LTBP3-205	ENST00000526124	KRTAP4-2	Q9BYR5	136 aa		3.83	□□□□□ -1.8
LTBP3-205	ENST00000526124	INE1	O15225	51 aa		3.6	□□□□□ -1.83
LTBP3-205	ENST00000526124	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.53	□□□□□ -1.84
LTBP3-205	ENST00000526124	KRTAP5-11	Q6L8G4	156 aa		3.4	□□□□□ -1.87
LTBP3-205	ENST00000526124	KRTAP4-12	Q9BQ66	201 aa		3.32	□□□□□ -1.88
LTBP3-205	ENST00000526124	KRTAP21-2	Q3LI59	83 aa		3.3	□□□□□ -1.88
LTBP3-205	ENST00000526124	PRM1	P04553	51 aa		3.22	□□□□□ -1.89
LTBP3-205	ENST00000526124	LCE1F	Q5T754	118 aa		3.22	□□□□□ -1.89
LTBP3-205	ENST00000526124	KRTAP4-4	Q9BYR3	166 aa		2.94	□□□□□ -1.94
LTBP3-205	ENST00000526124	PHGR1	C9JFL3	82 aa		2.93	□□□□□ -1.94
LTBP3-205	ENST00000526124	MUC19	Q7Z5P9	8384 aa		2.54	□□□□□ -2
LTBP3-205	ENST00000526124	KRTAP21-1	Q3LI58	79 aa		2.09	□□□□□ -2.07
LTBP3-205	ENST00000526124	MUC16	Q8WXI7	14507 aa		1.83	□□□□□ -2.12

Retrieved 78 of 20,778 RNA–protein pairs in 156.8 ms