RNA–Protein interactions for RNA: ENST00000525987.5

SDHD-211, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 4

Gene SDHD, Length 968 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-211ENST00000525987 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
SDHD-211ENST00000525987 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
SDHD-211ENST00000525987 CCDC179H3BU77 68 aa4.5□□□□□ -1.69
SDHD-211ENST00000525987 MT1GP13640 62 aa4.5□□□□□ -1.69
SDHD-211ENST00000525987 MT1MQ8N339 61 aa4.48□□□□□ -1.69
SDHD-211ENST00000525987 MT1LQ93083 61 aa4.46□□□□□ -1.7
SDHD-211ENST00000525987 SPINT4Q6UDR6 99 aa4.45□□□□□ -1.7
SDHD-211ENST00000525987 KRTAP4-3Q9BYR4 195 aa4.45□□□□□ -1.7
SDHD-211ENST00000525987 AHNAK2Q8IVF2 5795 aa4.45□□□□□ -1.7
SDHD-211ENST00000525987 TMEM258P61165 79 aa4.44□□□□□ -1.7
SDHD-211ENST00000525987 A0A1B0GU33 70 aa4.42□□□□□ -1.7
SDHD-211ENST00000525987 MT4P47944 62 aa4.41□□□□□ -1.7
SDHD-211ENST00000525987 ATP5EP56381 51 aaPredicted RBP4.4□□□□□ -1.71
SDHD-211ENST00000525987 SERP1Q9Y6X1 66 aa4.4□□□□□ -1.71
SDHD-211ENST00000525987 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
SDHD-211ENST00000525987 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
SDHD-211ENST00000525987 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
SDHD-211ENST00000525987 H7BZZ5 65 aa4.37□□□□□ -1.71
SDHD-211ENST00000525987 SEC61GP60059 68 aa4.37□□□□□ -1.71
SDHD-211ENST00000525987 A8MU10 97 aa4.36□□□□□ -1.71
SDHD-211ENST00000525987 RPS28P62857 69 aaKnown RBP4.36□□□□□ -1.71
SDHD-211ENST00000525987 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
SDHD-211ENST00000525987 KRTAP5-10Q6L8G5 202 aa4.32□□□□□ -1.72
SDHD-211ENST00000525987 SMIM26A0A096LP01 95 aa4.25□□□□□ -1.73
SDHD-211ENST00000525987 A0A1B0GU69 56 aa4.24□□□□□ -1.73
SDHD-211ENST00000525987 TNP1P09430 55 aa4.23□□□□□ -1.73
SDHD-211ENST00000525987 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.74
SDHD-211ENST00000525987 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
SDHD-211ENST00000525987 KRTAP12-3P60328 96 aa4.16□□□□□ -1.74
SDHD-211ENST00000525987 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.15□□□□□ -1.75
SDHD-211ENST00000525987 V9GYY9 64 aa4.14□□□□□ -1.75
SDHD-211ENST00000525987 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
SDHD-211ENST00000525987 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
SDHD-211ENST00000525987 Q1T7F1 81 aa4.07□□□□□ -1.76
SDHD-211ENST00000525987 LINC01558Q9Y6Z2 57 aa4.06□□□□□ -1.76
SDHD-211ENST00000525987 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
SDHD-211ENST00000525987 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
SDHD-211ENST00000525987 PRR15LQ9BU68 103 aa4□□□□□ -1.77
SDHD-211ENST00000525987 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
SDHD-211ENST00000525987 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
SDHD-211ENST00000525987 PSPHP1O15172 72 aa3.94□□□□□ -1.78
SDHD-211ENST00000525987 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
SDHD-211ENST00000525987 BRK1Q8WUW1 75 aa3.93□□□□□ -1.78
SDHD-211ENST00000525987 UQCR11O14957 56 aa3.92□□□□□ -1.78
SDHD-211ENST00000525987 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
SDHD-211ENST00000525987 A6NED7 52 aa3.88□□□□□ -1.79
SDHD-211ENST00000525987 MIR22HGQ0VDD5 57 aa3.84□□□□□ -1.79
SDHD-211ENST00000525987 CDC42SE1Q9NRR8 79 aa3.84□□□□□ -1.79
SDHD-211ENST00000525987 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
SDHD-211ENST00000525987 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
SDHD-211ENST00000525987 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
SDHD-211ENST00000525987 MT1AP04731 61 aa3.77□□□□□ -1.81
SDHD-211ENST00000525987 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
SDHD-211ENST00000525987 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
SDHD-211ENST00000525987 PMAIP1Q13794 54 aa3.74□□□□□ -1.81
SDHD-211ENST00000525987 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
SDHD-211ENST00000525987 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
SDHD-211ENST00000525987 K7ERS5 55 aa3.67□□□□□ -1.82
SDHD-211ENST00000525987 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
SDHD-211ENST00000525987 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.83
SDHD-211ENST00000525987 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
SDHD-211ENST00000525987 KTN1-AS1Q86SY8 53 aa3.64□□□□□ -1.83
SDHD-211ENST00000525987 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
SDHD-211ENST00000525987 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
SDHD-211ENST00000525987 ROMO1P60602 79 aa3.51□□□□□ -1.85
SDHD-211ENST00000525987 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
SDHD-211ENST00000525987 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
SDHD-211ENST00000525987 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
SDHD-211ENST00000525987 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
SDHD-211ENST00000525987 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
SDHD-211ENST00000525987 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
SDHD-211ENST00000525987 PHGR1C9JFL3 82 aa2.53□□□□□ -2
SDHD-211ENST00000525987 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
SDHD-211ENST00000525987 INE1O15225 51 aa2.44□□□□□ -2.02
SDHD-211ENST00000525987 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
SDHD-211ENST00000525987 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
SDHD-211ENST00000525987 PRM1P04553 51 aa1.82□□□□□ -2.12
SDHD-211ENST00000525987 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms