RNA–Protein interactions for RNA: ENST00000525375.1

GPATCH4-212, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-212ENST00000525375 PSPHP1O15172 72 aa4.51□□□□□ -1.69
GPATCH4-212ENST00000525375 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
GPATCH4-212ENST00000525375 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
GPATCH4-212ENST00000525375 Q1T7F1 81 aa4.49□□□□□ -1.69
GPATCH4-212ENST00000525375 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
GPATCH4-212ENST00000525375 MIR22HGQ0VDD5 57 aa4.46□□□□□ -1.7
GPATCH4-212ENST00000525375 MT1EP04732 61 aa4.44□□□□□ -1.7
GPATCH4-212ENST00000525375 SPRR2DP22532 72 aa4.42□□□□□ -1.7
GPATCH4-212ENST00000525375 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
GPATCH4-212ENST00000525375 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
GPATCH4-212ENST00000525375 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
GPATCH4-212ENST00000525375 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
GPATCH4-212ENST00000525375 TNP1P09430 55 aa4.37□□□□□ -1.71
GPATCH4-212ENST00000525375 RPS28P62857 69 aaKnown RBP4.36□□□□□ -1.71
GPATCH4-212ENST00000525375 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.71
GPATCH4-212ENST00000525375 A6NED7 52 aa4.31□□□□□ -1.72
GPATCH4-212ENST00000525375 MT1LQ93083 61 aa4.27□□□□□ -1.73
GPATCH4-212ENST00000525375 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
GPATCH4-212ENST00000525375 KRTAP2-1Q9BYU5 128 aa4.26□□□□□ -1.73
GPATCH4-212ENST00000525375 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
GPATCH4-212ENST00000525375 K7ERS5 55 aa4.23□□□□□ -1.73
GPATCH4-212ENST00000525375 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
GPATCH4-212ENST00000525375 MT1GP13640 62 aa4.21□□□□□ -1.74
GPATCH4-212ENST00000525375 MT1MQ8N339 61 aa4.21□□□□□ -1.74
GPATCH4-212ENST00000525375 KRTAP25-1Q3LHN0 102 aa4.2□□□□□ -1.74
GPATCH4-212ENST00000525375 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
GPATCH4-212ENST00000525375 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
GPATCH4-212ENST00000525375 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
GPATCH4-212ENST00000525375 CDC42SE1Q9NRR8 79 aa4.16□□□□□ -1.74
GPATCH4-212ENST00000525375 GPR98Q8WXG9 6306 aa4.15□□□□□ -1.75
GPATCH4-212ENST00000525375 PP632Q6XCG6 107 aa4.12□□□□□ -1.75
GPATCH4-212ENST00000525375 ROMO1P60602 79 aa4.08□□□□□ -1.76
GPATCH4-212ENST00000525375 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
GPATCH4-212ENST00000525375 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
GPATCH4-212ENST00000525375 KRTAP15-1Q3LI76 137 aa3.95□□□□□ -1.78
GPATCH4-212ENST00000525375 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.79
GPATCH4-212ENST00000525375 BRK1Q8WUW1 75 aa3.9□□□□□ -1.79
GPATCH4-212ENST00000525375 MT4P47944 62 aa3.89□□□□□ -1.79
GPATCH4-212ENST00000525375 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
GPATCH4-212ENST00000525375 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
GPATCH4-212ENST00000525375 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
GPATCH4-212ENST00000525375 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.81
GPATCH4-212ENST00000525375 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
GPATCH4-212ENST00000525375 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
GPATCH4-212ENST00000525375 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
GPATCH4-212ENST00000525375 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
GPATCH4-212ENST00000525375 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
GPATCH4-212ENST00000525375 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
GPATCH4-212ENST00000525375 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
GPATCH4-212ENST00000525375 MT1AP04731 61 aa3.61□□□□□ -1.83
GPATCH4-212ENST00000525375 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
GPATCH4-212ENST00000525375 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
GPATCH4-212ENST00000525375 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
GPATCH4-212ENST00000525375 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
GPATCH4-212ENST00000525375 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
GPATCH4-212ENST00000525375 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
GPATCH4-212ENST00000525375 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
GPATCH4-212ENST00000525375 MT3P25713 68 aa3.25□□□□□ -1.89
GPATCH4-212ENST00000525375 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
GPATCH4-212ENST00000525375 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
GPATCH4-212ENST00000525375 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
GPATCH4-212ENST00000525375 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
GPATCH4-212ENST00000525375 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
GPATCH4-212ENST00000525375 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
GPATCH4-212ENST00000525375 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
GPATCH4-212ENST00000525375 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
GPATCH4-212ENST00000525375 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
GPATCH4-212ENST00000525375 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
GPATCH4-212ENST00000525375 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
GPATCH4-212ENST00000525375 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
GPATCH4-212ENST00000525375 INE1O15225 51 aa2.73□□□□□ -1.97
GPATCH4-212ENST00000525375 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
GPATCH4-212ENST00000525375 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
GPATCH4-212ENST00000525375 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
GPATCH4-212ENST00000525375 PRM1P04553 51 aa2.14□□□□□ -2.07
GPATCH4-212ENST00000525375 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
GPATCH4-212ENST00000525375 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
GPATCH4-212ENST00000525375 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 100.1 ms